Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 Y_RNA.23-201ENST00000362496 106 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.170-201ENST00000363746 110 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 RNU6-674P-201ENST00000363831 107 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.272-201ENST00000364696 102 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 MIR515-2-201ENST00000384883 83 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 MIR515-1-201ENST00000384884 83 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 MIR15B-201ENST00000385045 98 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 MLLT10P1-201ENST00000418346 262 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 MIR4448-201ENST00000584360 86 ntBASIC2.4□□□□□ -2.03
CCDC178Q5BJE1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 SNORA3A-201ENST00000364113 130 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 RNU6-728P-201ENST00000365375 104 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 RNA5SP37-201ENST00000365420 130 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 RNU6-1130P-201ENST00000365434 107 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 RNU4-61P-201ENST00000411243 107 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 AC023449.1-201ENST00000454464 154 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 RNU6-346P-201ENST00000516288 111 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 MIR5688-201ENST00000580619 83 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 AC091178.2-201ENST00000584401 117 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 AC022513.1-201ENST00000624512 117 ntBASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC178Q5BJE1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 SNORD114-1-201ENST00000362705 72 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNU6-187P-201ENST00000384139 106 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.506-201ENST00000384494 102 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 MIR518A2-201ENST00000384966 87 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNA5SP109-201ENST00000391010 116 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNU6-1228P-201ENST00000391014 107 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNU6-394P-201ENST00000410735 107 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNU1-40P-201ENST00000516816 164 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNU2-56P-201ENST00000516826 190 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNU1-97P-201ENST00000516872 164 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 MIR2681-201ENST00000581814 105 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 AC005786.1-201ENST00000588553 154 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC178Q5BJE1 RNA5SP496-201ENST00000391240 109 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 MIR1261-201ENST00000408659 82 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 RNU6-341P-201ENST00000516973 96 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 RNU6-1212P-201ENST00000517023 104 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 AC024995.1-201ENST00000523014 93 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 MIR4431-201ENST00000579990 94 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 AC069114.2-201ENST00000604699 304 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
CCDC178Q5BJE1 SNORA1B-201ENST00000362535 133 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 RNU4-84P-201ENST00000364200 139 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 RNU6-746P-201ENST00000384112 109 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.441-201ENST00000384123 112 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 RNU6-125P-201ENST00000384505 107 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 SNORA12.1-201ENST00000390873 148 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 HMGN2P39-201ENST00000398005 273 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 RN7SKP101-201ENST00000411376 320 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 AC245047.3-201ENST00000429428 127 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 AL606517.2-201ENST00000442855 241 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 snoU13.15-201ENST00000459407 104 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.703-201ENST00000516846 111 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
CCDC178Q5BJE1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 MIR126-201ENST00000362291 85 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 SNORD45.3-201ENST00000363836 72 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 RNU6-449P-201ENST00000383914 107 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 AC019129.1-201ENST00000403786 261 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 MIR1283-2-201ENST00000408621 87 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 SNRPGP10-201ENST00000432323 225 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 RNU7-94P-201ENST00000459576 63 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 AL049830.1-201ENST00000468034 425 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 RPS26P45-201ENST00000471748 340 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 AC107027.2-201ENST00000512197 115 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 AC022217.4-201ENST00000604389 163 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.35□□□□□ -2.03
CCDC178Q5BJE1 SNORD68-201ENST00000363214 84 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 RNU6-151P-201ENST00000364158 107 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 RNU6-643P-201ENST00000384018 107 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 SNORA79-201ENST00000408376 140 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 AL356379.1-201ENST00000414105 126 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 HMGN1P7-201ENST00000491722 313 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 RNU7-200P-201ENST00000516105 62 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 RNVU1-2-201ENST00000516326 135 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 AP002004.2-201ENST00000531656 154 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 AC084364.2-201ENST00000546924 395 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 uc_338.4-201ENST00000616635 176 ntBASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC178Q5BJE1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC178Q5BJE1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CCDC178Q5BJE1 Y_RNA.521-201ENST00000384560 114 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms