Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NCBP3Q53F19 RNU6-1237P-201ENST00000384777 107 ntBASIC5.47□□□□□ -1.53
NCBP3Q53F19 MIR4796-201ENST00000580742 81 ntBASIC5.47□□□□□ -1.53
NCBP3Q53F19 MIR3616-201ENST00000584070 92 ntBASIC5.47□□□□□ -1.53
NCBP3Q53F19 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NCBP3Q53F19 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC5.47□□□□□ -1.53
NCBP3Q53F19 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.46□□□□□ -1.53
NCBP3Q53F19 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.46□□□□□ -1.54
NCBP3Q53F19 MIR1193-201ENST00000408109 78 ntBASIC5.46□□□□□ -1.54
NCBP3Q53F19 RPS29P19-201ENST00000479709 171 ntBASIC5.46□□□□□ -1.54
NCBP3Q53F19 RN7SL600P-201ENST00000581811 299 ntBASIC5.46□□□□□ -1.54
NCBP3Q53F19 MIR4484-201ENST00000582855 83 ntBASIC5.46□□□□□ -1.54
NCBP3Q53F19 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC5.46□□□□□ -1.54
NCBP3Q53F19 MIR492-201ENST00000638676 116 ntBASIC5.46□□□□□ -1.54
NCBP3Q53F19 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
NCBP3Q53F19 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NCBP3Q53F19 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NCBP3Q53F19 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.45□□□□□ -1.54
NCBP3Q53F19 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.45□□□□□ -1.54
NCBP3Q53F19 AC025445.1-201ENST00000502728 300 ntBASIC5.45□□□□□ -1.54
NCBP3Q53F19 RNU6-70P-201ENST00000516438 60 ntBASIC5.45□□□□□ -1.54
NCBP3Q53F19 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NCBP3Q53F19 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NCBP3Q53F19 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NCBP3Q53F19 MIR383-201ENST00000362257 73 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 RNA5SP97-201ENST00000365006 84 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 RNU6-950P-201ENST00000384651 107 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.44□□□□□ -1.54
NCBP3Q53F19 AC004975.1-201ENST00000428733 208 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NCBP3Q53F19 MIR1254-2-201ENST00000579553 63 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 MIR6716-201ENST00000613413 80 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 AC068724.3-201ENST00000625906 87 ntBASIC5.44□□□□□ -1.54
NCBP3Q53F19 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC5.44□□□□□ -1.54
NCBP3Q53F19 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NCBP3Q53F19 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NCBP3Q53F19 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NCBP3Q53F19 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NCBP3Q53F19 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NCBP3Q53F19 SNORA25.9-201ENST00000365087 128 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NCBP3Q53F19 RN7SKP220-201ENST00000410611 288 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 AC006011.1-201ENST00000442758 349 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC5.43□□□□□ -1.54
NCBP3Q53F19 RNU7-85P-201ENST00000458851 63 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 RNU7-143P-201ENST00000516781 65 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 MIR3939-201ENST00000582614 106 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 AC005786.1-201ENST00000588553 154 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 RPL12P50-201ENST00000603116 116 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 AL512598.1-201ENST00000610158 273 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 AL449363.1-201ENST00000617815 186 ntBASIC5.43□□□□□ -1.54
NCBP3Q53F19 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
NCBP3Q53F19 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NCBP3Q53F19 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NCBP3Q53F19 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NCBP3Q53F19 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NCBP3Q53F19 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NCBP3Q53F19 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.42□□□□□ -1.54
NCBP3Q53F19 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
NCBP3Q53F19 RPS29P11-201ENST00000496507 171 ntBASIC5.42□□□□□ -1.54
NCBP3Q53F19 MIR5094-201ENST00000578766 85 ntBASIC5.42□□□□□ -1.54
NCBP3Q53F19 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NCBP3Q53F19 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NCBP3Q53F19 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NCBP3Q53F19 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NCBP3Q53F19 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
NCBP3Q53F19 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.41□□□□□ -1.54
NCBP3Q53F19 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NCBP3Q53F19 HSBP1P2-201ENST00000299671 229 ntBASIC5.41□□□□□ -1.54
NCBP3Q53F19 RNU6-1031P-201ENST00000384773 107 ntBASIC5.41□□□□□ -1.54
NCBP3Q53F19 MIR93-201ENST00000385024 80 ntBASIC5.41□□□□□ -1.54
NCBP3Q53F19 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NCBP3Q53F19 CYCSP29-201ENST00000533731 318 ntBASIC5.41□□□□□ -1.54
NCBP3Q53F19 SNORA62.6-201ENST00000606322 83 ntBASIC5.41□□□□□ -1.54
NCBP3Q53F19 Z97988.1-201ENST00000637697 135 ntBASIC5.41□□□□□ -1.54
NCBP3Q53F19 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NCBP3Q53F19 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NCBP3Q53F19 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.4□□□□□ -1.54
NCBP3Q53F19 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NCBP3Q53F19 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.4□□□□□ -1.54
NCBP3Q53F19 RNU6-649P-201ENST00000384463 107 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 MIR526A1-201ENST00000384897 85 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 RPL23AP6-201ENST00000446637 472 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 RN7SL604P-201ENST00000492589 296 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 RN7SKP132-201ENST00000516001 208 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 Y_RNA.660-201ENST00000516002 120 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 Y_RNA.681-201ENST00000516445 113 ntBASIC5.4□□□□□ -1.54
NCBP3Q53F19 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.4□□□□□ -1.54
NCBP3Q53F19 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.4□□□□□ -1.55
NCBP3Q53F19 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCBP3Q53F19 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NCBP3Q53F19 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
NCBP3Q53F19 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NCBP3Q53F19 RNU6-634P-201ENST00000459134 106 ntBASIC5.39□□□□□ -1.55
NCBP3Q53F19 AC133485.1-201ENST00000567176 124 ntBASIC5.39□□□□□ -1.55
NCBP3Q53F19 MIR5684-201ENST00000585074 65 ntBASIC5.39□□□□□ -1.55
NCBP3Q53F19 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NCBP3Q53F19 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NCBP3Q53F19 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.39□□□□□ -1.55
NCBP3Q53F19 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms