Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.23□□□□□ -2.05
LONRF3Q496Y0 RNU6-182P-201ENST00000516970 105 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 DEFB122-202ENST00000569013 197 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 AC004792.1-201ENST00000614523 137 ntBASIC2.23□□□□□ -2.05
LONRF3Q496Y0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LONRF3Q496Y0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 RNU6-144P-201ENST00000383951 107 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 RPL23AP54-201ENST00000495129 419 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 AL163195.1-201ENST00000496941 348 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.22□□□□□ -2.05
LONRF3Q496Y0 AC024995.1-201ENST00000523014 93 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LONRF3Q496Y0 MIR4308-201ENST00000580634 81 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.22□□□□□ -2.05
LONRF3Q496Y0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.22□□□□□ -2.05
LONRF3Q496Y0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
LONRF3Q496Y0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LONRF3Q496Y0 SNORA72-201ENST00000384339 132 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 SNORA8.3-201ENST00000384679 139 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 SNORA40.18-201ENST00000391200 128 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 HSPE1P9-201ENST00000440046 311 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.21□□□□□ -2.06
LONRF3Q496Y0 AC091021.1-201ENST00000468051 388 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 RPS26P45-201ENST00000471748 340 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.21□□□□□ -2.06
LONRF3Q496Y0 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 MIR3935-201ENST00000583472 104 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.21□□□□□ -2.06
LONRF3Q496Y0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.21□□□□□ -2.06
LONRF3Q496Y0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
LONRF3Q496Y0 RNU6-296P-201ENST00000384608 107 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 MIR626-201ENST00000385032 94 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 MIR520G-201ENST00000385064 90 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
LONRF3Q496Y0 RNU6-918P-201ENST00000391219 106 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 COX6CP10-201ENST00000416832 224 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 CYCSP49-201ENST00000420810 319 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 PIGPP3-201ENST00000425307 415 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 AC245047.4-201ENST00000433189 144 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 RPL23AP63-201ENST00000498752 471 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 AC107393.1-201ENST00000512403 346 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 RNU6-295P-201ENST00000516901 104 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 AP002392.1-201ENST00000537692 208 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 AC091178.2-201ENST00000584401 117 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 MIR6079-201ENST00000635807 62 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 AC018630.2-201ENST00000534866 2403 ntBASIC2.2□□□□□ -2.06
LONRF3Q496Y0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
LONRF3Q496Y0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 RNU4-17P-201ENST00000365598 141 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 MIR526A2-201ENST00000390198 65 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 U8.13-201ENST00000390842 128 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 RNU11-5P-201ENST00000391216 129 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 SUMO2P12-201ENST00000405924 140 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 RNU6-383P-201ENST00000410864 94 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 AC003989.2-201ENST00000440224 169 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 HMGN2P23-201ENST00000456759 269 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 RNU6-437P-201ENST00000459408 95 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 RNA5SP437-201ENST00000517249 129 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 AC022559.1-201ENST00000520905 205 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 AC011604.1-201ENST00000545978 196 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 MIR4724-201ENST00000579485 89 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 AL929325.1-201ENST00000603096 117 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 AC098479.1-201ENST00000609225 154 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 MIR8074-201ENST00000615081 81 ntBASIC2.19□□□□□ -2.06
LONRF3Q496Y0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.19□□□□□ -2.06
LONRF3Q496Y0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
LONRF3Q496Y0 MIR367-201ENST00000362299 68 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 RNU6-969P-201ENST00000383900 105 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 RNU7-120P-201ENST00000459334 63 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 RNA5SP481-201ENST00000516814 122 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 RNU6-548P-201ENST00000517083 115 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 MIR6845-201ENST00000613182 61 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 AL353997.5-201ENST00000618886 171 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.18□□□□□ -2.06
LONRF3Q496Y0 AC100821.1-201ENST00000523153 2479 ntBASIC2.18□□□□□ -2.06
LONRF3Q496Y0 RNU6-674P-201ENST00000363831 107 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 RNU6-381P-201ENST00000391259 108 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 MIR1267-201ENST00000408723 78 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 AC233266.1-201ENST00000454518 96 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 RNU6-341P-201ENST00000516973 96 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 MIR4285-201ENST00000581001 85 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 AC012493.3-201ENST00000604494 112 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 AC242852.1-201ENST00000612151 96 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 AC244015.1-201ENST00000622301 99 ntBASIC2.17□□□□□ -2.06
LONRF3Q496Y0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LONRF3Q496Y0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
LONRF3Q496Y0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LONRF3Q496Y0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LONRF3Q496Y0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LONRF3Q496Y0 Y_RNA.7-201ENST00000362352 102 ntBASIC2.16□□□□□ -2.06
LONRF3Q496Y0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms