Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 RNU2-61P-201ENST00000411069 191 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 AC096644.2-201ENST00000429278 159 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 U8.19-201ENST00000459095 133 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 RNU6-277P-201ENST00000516272 106 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.718-201ENST00000517110 102 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 SNORD116.3-201ENST00000517176 78 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 AC006600.1-201ENST00000572529 153 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 AC084781.2-201ENST00000615568 161 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 AL591926.4-201ENST00000616895 298 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 U6.92-201ENST00000636464 89 ntBASIC0.96□□□□□ -2.26
LRIT3Q3SXY7 SNORA72.1-201ENST00000363485 129 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.390-201ENST00000383932 102 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 SNORD116-13-201ENST00000384408 92 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 SNORD116-29-201ENST00000384516 83 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 RNU6-710P-201ENST00000410424 105 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 AC093019.1-201ENST00000443135 252 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 AC114811.1-201ENST00000507207 168 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 RNU11-2P-201ENST00000516898 142 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 RN7SKP295-201ENST00000517264 153 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 AL627230.5-201ENST00000619807 58 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 AC138305.3-201ENST00000624988 240 ntBASIC0.95□□□□□ -2.26
LRIT3Q3SXY7 SNORA80D-201ENST00000384488 135 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 MIR526A1-201ENST00000384897 85 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 AC063976.4-201ENST00000421971 163 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 RNU6-436P-201ENST00000516171 114 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 SNORD111.1-201ENST00000516421 86 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 AL512605.2-201ENST00000592972 256 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 AC005972.2-201ENST00000604690 348 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 AC022441.3-201ENST00000605737 136 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 AL132765.2-201ENST00000610812 351 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 AL138825.1-201ENST00000618587 192 ntBASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LRIT3Q3SXY7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 RNU6-1084P-201ENST00000362498 107 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.70-201ENST00000362886 110 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.187-201ENST00000363918 113 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 U8.5-201ENST00000364528 136 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.336-201ENST00000365307 109 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 RNU6-708P-201ENST00000384217 107 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 RNU6-1199P-201ENST00000411249 104 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 AL390729.2-201ENST00000416137 156 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 MLLT10P1-201ENST00000418346 262 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 AC005042.3-201ENST00000453230 174 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 SNORD79.1-201ENST00000516069 84 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 AL355375.2-201ENST00000574825 175 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 AC004832.4-201ENST00000608952 331 ntBASIC0.93□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 RNU6-1175P-201ENST00000365200 107 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 RNU6-1283P-201ENST00000365314 105 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.463-201ENST00000384271 102 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 MIR19B1-201ENST00000384829 87 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 MCFD2P1-201ENST00000417812 300 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 AC236972.2-201ENST00000434979 310 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 RPS20P10-201ENST00000451209 253 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 MIR4762-201ENST00000585261 75 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 RPS29P30-201ENST00000600975 111 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.772-201ENST00000606692 102 ntBASIC0.92□□□□□ -2.26
LRIT3Q3SXY7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.39-201ENST00000362620 98 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.253-201ENST00000364562 112 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 RNU1-36P-201ENST00000365130 165 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.329-201ENST00000365209 107 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 SNORA72-201ENST00000384339 132 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 MIR1298-201ENST00000408783 112 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 RNU6-855P-201ENST00000410395 104 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 AC024067.1-201ENST00000426199 223 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.632-201ENST00000459189 102 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.661-201ENST00000516003 99 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 MIR2909-201ENST00000617113 69 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 MIR4272-201ENST00000635924 64 ntBASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LRIT3Q3SXY7 Y_RNA.172-201ENST00000363765 102 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 MIR15B-201ENST00000385045 98 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 MIR136-201ENST00000385207 82 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 RNU6-131P-201ENST00000391144 107 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 AC002429.1-201ENST00000437672 148 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 AC091951.2-201ENST00000500762 203 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 AL008636.1-201ENST00000625038 1018 ntBASIC0.9□□□□□ -2.27
LRIT3Q3SXY7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
LRIT3Q3SXY7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.89□□□□□ -2.27
LRIT3Q3SXY7 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
LRIT3Q3SXY7 Y_RNA.570-201ENST00000384750 101 ntBASIC0.89□□□□□ -2.27
LRIT3Q3SXY7 MIR522-201ENST00000385071 87 ntBASIC0.89□□□□□ -2.27
LRIT3Q3SXY7 RNU6-1009P-201ENST00000390996 107 ntBASIC0.89□□□□□ -2.27
LRIT3Q3SXY7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms