Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 Y_RNA.171-201ENST00000363760 102 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 SNORD14E-201ENST00000364009 85 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 MIR519C-201ENST00000385053 87 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 RPL31P63-201ENST00000422565 375 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 RNA5SP341-201ENST00000516261 117 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 Z83843.1-201ENST00000604070 3685 ntBASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CTC1Q2NKJ3 AC093908.1-201ENST00000623125 8092 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 RNA5SP42-201ENST00000364278 115 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 RNA5SP139-201ENST00000364340 117 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 SNORD77B-201ENST00000391112 67 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 POLR2J4-204ENST00000418424 324 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 RPS15AP28-201ENST00000435088 386 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 RNU7-113P-201ENST00000459273 62 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 SNORD59.2-201ENST00000516873 68 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 RNU6-579P-201ENST00000516879 102 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 AC140658.3-201ENST00000567603 271 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 MIR4672-201ENST00000583126 81 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 AL033523.1-201ENST00000605153 153 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 AC021613.1-201ENST00000623880 111 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 AC018630.2-201ENST00000534866 2403 ntBASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.66□□□□□ -1.82
CTC1Q2NKJ3 SNORD68-201ENST00000363214 84 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 RNU6-1163P-201ENST00000364516 107 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 RNU6-987P-201ENST00000384759 104 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 MIR1265-201ENST00000408444 86 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 RNU4-47P-201ENST00000410876 114 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 MIR1270-201ENST00000459320 83 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 RNU2-34P-201ENST00000516534 121 ntBASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTC1Q2NKJ3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 RNU6-1084P-201ENST00000362498 107 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 RNU6-315P-201ENST00000362666 107 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 AC006989.1-201ENST00000427212 131 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 SNRPGP14-201ENST00000435400 219 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 RNU6-1258P-201ENST00000516911 111 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 MIR548AE2-201ENST00000583456 67 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 U2.20-201ENST00000613956 192 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 SEPT14P17-201ENST00000617978 177 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 MIR6079-201ENST00000635807 62 ntBASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTC1Q2NKJ3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 MIR30E-201ENST00000362104 92 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 Y_RNA.57-201ENST00000362806 113 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 SNORD115-37-201ENST00000363768 82 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 AL627390.1-201ENST00000396055 340 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 RNU4-37P-201ENST00000410214 84 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 AC244505.4-201ENST00000434905 287 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 SSXP5-201ENST00000443473 287 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 RNU6-965P-201ENST00000516721 96 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 MIR4276-201ENST00000584832 70 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTC1Q2NKJ3 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 RNU6-301P-201ENST00000384277 107 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 Y_RNA.470-201ENST00000384307 117 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 RNU1-101P-201ENST00000391171 127 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 AL161932.1-201ENST00000437408 146 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 AC087499.4-201ENST00000448505 178 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 HMGN2P18-201ENST00000450680 270 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 RNU7-45P-201ENST00000459460 63 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 RNU7-99P-201ENST00000516271 62 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 RNU6-341P-201ENST00000516973 96 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 RNU7-128P-201ENST00000517247 62 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 UCA1.1-201ENST00000620952 75 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTC1Q2NKJ3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 AC092881.1-201ENST00000638218 2733 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 RNU6-478P-201ENST00000363904 110 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 SNORA44-201ENST00000384584 132 ntBASIC3.61□□□□□ -1.83
CTC1Q2NKJ3 AC006539.3-201ENST00000454258 129 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms