Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNRPGP14-201ENST00000435400 219 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 RN7SL633P-201ENST00000488974 297 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 RNU6-240P-201ENST00000516098 97 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 SNORD45.4-201ENST00000516629 73 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
PCDH1Q08174 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH1Q08174 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH1Q08174 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCDH1Q08174 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH1Q08174 SNORD115-28-201ENST00000363931 81 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 RNU6-1107P-201ENST00000364817 104 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 RNU6-106P-201ENST00000384405 107 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 Y_RNA.547-201ENST00000384654 119 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 SNORD12C-201ENST00000386307 89 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH1Q08174 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDH1Q08174 AL606517.2-201ENST00000442855 241 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 RN7SL504P-201ENST00000494496 287 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 RNU7-28P-201ENST00000516759 62 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 SCARNA15.3-201ENST00000626315 122 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 SCARNA4.1-201ENST00000628597 123 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.91□□□□□ -1.94
PCDH1Q08174 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH1Q08174 MIR22-201ENST00000362190 85 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 Y_RNA.37-201ENST00000362606 108 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 Y_RNA.265-201ENST00000364677 108 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 Y_RNA.336-201ENST00000365307 109 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 MIR627-201ENST00000384979 97 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 AC107083.1-201ENST00000439643 279 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 AL109933.2-201ENST00000452651 260 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 Y_RNA.694-201ENST00000516677 117 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 RNU6-56P-201ENST00000516986 93 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 AC026271.5-201ENST00000577873 130 ntBASIC2.9□□□□□ -1.95
PCDH1Q08174 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH1Q08174 Y_RNA.85-201ENST00000363014 111 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 SNORA80E-201ENST00000384744 137 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 SNORA11.4-201ENST00000408823 129 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 RNU6-554P-201ENST00000410466 106 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.89□□□□□ -1.95
PCDH1Q08174 AL445646.1-201ENST00000431784 216 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH1Q08174 RPS29P24-201ENST00000486345 171 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 RNU7-70P-201ENST00000516941 66 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDH1Q08174 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 MIR8057-201ENST00000620957 69 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 ZNF720P1-201ENST00000562403 1939 ntBASIC2.89□□□□□ -1.95
PCDH1Q08174 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDH1Q08174 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH1Q08174 SNORD115-3-201ENST00000363100 82 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 RNU6-690P-201ENST00000365242 106 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDH1Q08174 RNA5SP109-201ENST00000391010 116 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH1Q08174 HMGN2P32-201ENST00000444648 269 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 SNORD36C-201ENST00000516733 66 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDH1Q08174 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDH1Q08174 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 AC022513.1-201ENST00000624512 117 ntBASIC2.88□□□□□ -1.95
PCDH1Q08174 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDH1Q08174 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDH1Q08174 ICE2P2-201ENST00000483823 2787 ntBASIC2.87□□□□□ -1.95
PCDH1Q08174 Y_RNA.549-201ENST00000384657 102 ntBASIC2.87□□□□□ -1.95
PCDH1Q08174 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDH1Q08174 AC104389.3-201ENST00000445629 235 ntBASIC2.87□□□□□ -1.95
PCDH1Q08174 MIR4325-201ENST00000583049 90 ntBASIC2.87□□□□□ -1.95
PCDH1Q08174 AC006254.2-201ENST00000603259 279 ntBASIC2.87□□□□□ -1.95
PCDH1Q08174 MIR4679-1-201ENST00000637619 75 ntBASIC2.87□□□□□ -1.95
PCDH1Q08174 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDH1Q08174 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDH1Q08174 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDH1Q08174 RNU6-349P-201ENST00000362402 107 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 Y_RNA.198-201ENST00000364013 98 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 RNU6-851P-201ENST00000384565 107 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 RNU6-938P-201ENST00000411285 103 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 AC092427.1-202ENST00000430569 476 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDH1Q08174 Y_RNA.677-201ENST00000516401 85 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 AC107016.2-201ENST00000547968 190 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 AC005786.1-201ENST00000588553 154 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 AC015726.2-201ENST00000620112 122 ntBASIC2.86□□□□□ -1.95
PCDH1Q08174 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
PCDH1Q08174 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDH1Q08174 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH1Q08174 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH1Q08174 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 SNORA71.1-201ENST00000364523 117 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 Y_RNA.440-201ENST00000384120 114 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 STAG3L5P-204ENST00000443759 179 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 AC087499.4-201ENST00000448505 178 ntBASIC2.85□□□□□ -1.95
PCDH1Q08174 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDH1Q08174 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms