Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 AC245884.12-201ENST00000615364 59 ntBASIC2.37□□□□□ -2.03
IRF9Q00978 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IRF9Q00978 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
IRF9Q00978 RNU6-199P-201ENST00000362954 107 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 RNU6-704P-201ENST00000364162 103 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 U8.5-201ENST00000364528 136 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 Y_RNA.343-201ENST00000365354 112 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 SNORD72-201ENST00000390994 80 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 SNORD37.2-201ENST00000391075 66 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.36□□□□□ -2.03
IRF9Q00978 STAG3L5P-204ENST00000443759 179 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 TMSB4XP3-201ENST00000445144 114 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 MIR548X2-201ENST00000579776 100 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 MIR4762-201ENST00000585261 75 ntBASIC2.36□□□□□ -2.03
IRF9Q00978 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
IRF9Q00978 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
IRF9Q00978 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
IRF9Q00978 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
IRF9Q00978 AL157777.2-201ENST00000258070 137 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 Y_RNA.242-201ENST00000364473 110 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 RNU6-597P-201ENST00000365620 102 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 Y_RNA.486-201ENST00000384398 107 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 MIR520A-201ENST00000384862 85 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 AL359511.1-201ENST00000402970 211 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
IRF9Q00978 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.35□□□□□ -2.03
IRF9Q00978 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.35□□□□□ -2.03
IRF9Q00978 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 SNORA31.10-201ENST00000516482 106 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 AC120024.3-201ENST00000603167 156 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 SNORA28-201ENST00000606769 126 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 U1.36-201ENST00000620684 176 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 U2.22-201ENST00000636441 106 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 MIR6844-201ENST00000637122 62 ntBASIC2.35□□□□□ -2.03
IRF9Q00978 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
IRF9Q00978 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
IRF9Q00978 RNU6-978P-201ENST00000364371 103 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 RNU6-950P-201ENST00000384651 107 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 MIR569-201ENST00000385228 96 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 MIR513C-201ENST00000401352 84 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 HSPE1P9-201ENST00000440046 311 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 AC112693.2-201ENST00000556538 232 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 AP001485.1-201ENST00000604799 199 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
IRF9Q00978 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.34□□□□□ -2.03
IRF9Q00978 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
IRF9Q00978 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
IRF9Q00978 RNU6-112P-201ENST00000363599 104 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 RNU1-138P-201ENST00000384093 164 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 MIR802-201ENST00000390235 94 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 SNORA75.5-201ENST00000391291 81 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 RN7SKP200-201ENST00000410564 320 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 AL158823.1-201ENST00000418441 478 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.33□□□□□ -2.04
IRF9Q00978 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 RNU6-365P-201ENST00000517113 106 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 RNA5SP437-201ENST00000517249 129 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.33□□□□□ -2.04
IRF9Q00978 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
IRF9Q00978 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
IRF9Q00978 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
IRF9Q00978 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
IRF9Q00978 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
IRF9Q00978 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
IRF9Q00978 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
IRF9Q00978 SNORA4.2-201ENST00000365313 147 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 RNU6-296P-201ENST00000384608 107 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 Y_RNA.568-201ENST00000384742 113 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 RPL23AP63-201ENST00000498752 471 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 SNORA25.12-201ENST00000516202 82 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 RNU6-426P-201ENST00000516464 97 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 RNA5SP148-201ENST00000516527 94 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.32□□□□□ -2.04
IRF9Q00978 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 MIR6817-201ENST00000615588 66 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 AC016717.2-201ENST00000609089 5141 ntBASIC2.32□□□□□ -2.04
IRF9Q00978 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
IRF9Q00978 RNU6-1084P-201ENST00000362498 107 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 Y_RNA.66-201ENST00000362862 102 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 RNA5SP68-201ENST00000363885 119 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 SNORD50B-201ENST00000364995 70 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 snoU2-30.1-201ENST00000365012 70 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 Y_RNA.497-201ENST00000384447 98 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 RPL30P13-201ENST00000418873 348 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.31□□□□□ -2.04
IRF9Q00978 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 AC046143.2-201ENST00000609789 160 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 AC132825.6-201ENST00000638861 357 ntBASIC2.31□□□□□ -2.04
IRF9Q00978 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.31□□□□□ -2.04
IRF9Q00978 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
IRF9Q00978 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
IRF9Q00978 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
IRF9Q00978 SNORD14E-201ENST00000364009 85 ntBASIC2.3□□□□□ -2.04
IRF9Q00978 SNORA25.7-201ENST00000364375 127 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms