Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNORD87-201ENST00000364849 89 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 SNORA1-201ENST00000384107 130 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 SNRPGP10-201ENST00000432323 225 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.47□□□□□ -2.49
HSPG2P98160 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.47□□□□□ -2.49
HSPG2P98160 RNU6-983P-201ENST00000516004 103 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 snoU83B.1-201ENST00000517136 88 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 MIR6129-201ENST00000616087 109 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.47□□□□□ -2.49
HSPG2P98160 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 SNORD110-201ENST00000408189 75 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 MTATP6P14-201ENST00000455189 673 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.48□□□□□ -2.49
HSPG2P98160 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.48□□□□□ -2.49
HSPG2P98160 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 RNU6-430P-201ENST00000517078 107 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AL445435.1-201ENST00000604232 665 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AC126544.2-201ENST00000625174 749 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 SNORA20B-201ENST00000384220 132 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.48□□□□□ -2.49
HSPG2P98160 AC105417.1-201ENST00000514691 285 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 RNU6-107P-201ENST00000516643 102 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 MIR5591-201ENST00000578248 65 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 MIR4491-201ENST00000581087 68 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 Z94722.1-201ENST00000604328 474 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AC068880.4-201ENST00000623082 495 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 RNU6-298P-201ENST00000390888 96 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 RNA5SP494-201ENST00000410653 129 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 MTND4LP7-201ENST00000431728 294 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.48□□□□□ -2.49
HSPG2P98160 RNU7-74P-201ENST00000459104 62 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 SNORD65B-201ENST00000459126 73 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AC022784.5-201ENST00000522241 437 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 FRG2DP-202ENST00000566967 323 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 uc_338.11-201ENST00000619132 160 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 RNA5SP93-201ENST00000362525 114 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
HSPG2P98160 AL590002.1-201ENST00000406554 418 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.48□□□□□ -2.49
HSPG2P98160 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.48□□□□□ -2.49
HSPG2P98160 FCF1P4-201ENST00000448326 183 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.48□□□□□ -2.49
HSPG2P98160 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.48□□□□□ -2.49
HSPG2P98160 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-462P-201ENST00000362659 105 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 SNORD14E-201ENST00000364009 85 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-481P-201ENST00000384194 107 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 MIR1284-201ENST00000408337 120 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 SNORA25.14-201ENST00000516481 132 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-201P-201ENST00000517100 61 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 AC104072.1-201ENST00000568817 668 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 MIR4770-201ENST00000579149 58 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 AC011373.1-201ENST00000607270 237 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 DISC2.1-201ENST00000612827 205 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-740P-201ENST00000364734 105 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 MIR558-201ENST00000384920 94 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RPL30P16-201ENST00000419341 429 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.49□□□□□ -2.49
HSPG2P98160 RPL7P42-201ENST00000481005 679 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-830P-201ENST00000516353 107 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.49□□□□□ -2.49
HSPG2P98160 SNORD38B-201ENST00000384690 67 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 AC022137.1-201ENST00000483735 151 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 MTCO3P42-201ENST00000509488 518 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 MTCO3P39-201ENST00000514812 518 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 SNORA25.13-201ENST00000516395 103 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 AP003733.2-201ENST00000529409 171 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 DEFB131E-201ENST00000532329 154 ntBASIC-0.49□□□□□ -2.49
HSPG2P98160 RNU6-509P-201ENST00000363519 107 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 RNU6-609P-201ENST00000365459 107 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 RNU6-900P-201ENST00000384498 102 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 RNA5SP261-201ENST00000410536 106 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 AC010598.1-201ENST00000510378 103 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 RNU2-13P-201ENST00000515909 113 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 MIR6082-201ENST00000613604 109 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 AP002782.1-201ENST00000623107 614 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 AC022418.1-201ENST00000624118 445 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
HSPG2P98160 MIR30D-201ENST00000362283 70 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 SNORD115-8-201ENST00000363856 82 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 SNORD115-38-201ENST00000365037 82 ntBASIC-0.5□□□□□ -2.49
HSPG2P98160 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms