Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR6079-201ENST00000635807 62 ntBASIC2.56□□□□□ -2
HERVK_113P62684 ZNF720P1-201ENST00000562403 1939 ntBASIC2.56□□□□□ -2
HERVK_113P62684 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HERVK_113P62684 Y_RNA.796-201ENST00000364268 102 ntBASIC2.55□□□□□ -2
HERVK_113P62684 Y_RNA.799-201ENST00000364992 102 ntBASIC2.55□□□□□ -2
HERVK_113P62684 MIR513C-201ENST00000401352 84 ntBASIC2.55□□□□□ -2
HERVK_113P62684 ZNF702P-202ENST00000434269 1966 ntBASIC2.55□□□□□ -2
HERVK_113P62684 AL021707.8-201ENST00000609428 183 ntBASIC2.55□□□□□ -2
HERVK_113P62684 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HERVK_113P62684 AC005336.3-201ENST00000623833 2679 ntBASIC2.54□□□□□ -2
HERVK_113P62684 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
HERVK_113P62684 RNU6-1164P-201ENST00000364428 107 ntBASIC2.54□□□□□ -2
HERVK_113P62684 Y_RNA.432-201ENST00000384087 111 ntBASIC2.54□□□□□ -2
HERVK_113P62684 Y_RNA.568-201ENST00000384742 113 ntBASIC2.54□□□□□ -2
HERVK_113P62684 SNORA80E-201ENST00000384744 137 ntBASIC2.54□□□□□ -2
HERVK_113P62684 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
HERVK_113P62684 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.54□□□□□ -2
HERVK_113P62684 HMGN2P23-201ENST00000456759 269 ntBASIC2.54□□□□□ -2
HERVK_113P62684 RNU6-1299P-201ENST00000516316 100 ntBASIC2.54□□□□□ -2
HERVK_113P62684 RNU6-548P-201ENST00000517083 115 ntBASIC2.54□□□□□ -2
HERVK_113P62684 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.54□□□□□ -2
HERVK_113P62684 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
HERVK_113P62684 uc_338.4-201ENST00000616635 176 ntBASIC2.54□□□□□ -2
HERVK_113P62684 U6.108-201ENST00000637764 58 ntBASIC2.54□□□□□ -2
HERVK_113P62684 AC018630.2-201ENST00000534866 2403 ntBASIC2.53□□□□□ -2
HERVK_113P62684 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
HERVK_113P62684 RNU6-768P-201ENST00000384683 107 ntBASIC2.53□□□□□ -2
HERVK_113P62684 AL117342.1-201ENST00000404861 406 ntBASIC2.53□□□□□ -2
HERVK_113P62684 RPS27P1-201ENST00000450552 247 ntBASIC2.53□□□□□ -2
HERVK_113P62684 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
HERVK_113P62684 SCARNA16.3-201ENST00000516595 184 ntBASIC2.53□□□□□ -2
HERVK_113P62684 AC091178.2-201ENST00000584401 117 ntBASIC2.53□□□□□ -2
HERVK_113P62684 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
HERVK_113P62684 MIR6844-201ENST00000637122 62 ntBASIC2.53□□□□□ -2
HERVK_113P62684 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
HERVK_113P62684 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
HERVK_113P62684 MIR569-201ENST00000385228 96 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 RNU4-43P-201ENST00000410628 137 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 SNORD11-201ENST00000459124 84 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 AC112693.2-201ENST00000556538 232 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 MIR3169-201ENST00000578032 83 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 AL353997.5-201ENST00000618886 171 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 AC009831.4-201ENST00000620744 325 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.52□□□□□ -2.01
HERVK_113P62684 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HERVK_113P62684 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 RNU1-148P-201ENST00000384472 162 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 SNORA20-201ENST00000384662 132 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 MIR515-2-201ENST00000384883 83 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 MIR515-1-201ENST00000384884 83 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 RNU2-70P-201ENST00000410718 179 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 MLLT10P1-201ENST00000418346 262 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 RPL30P13-201ENST00000418873 348 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 CYCSP49-201ENST00000420810 319 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 SUMO1P4-201ENST00000429430 302 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
HERVK_113P62684 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 RNU6-341P-201ENST00000516973 96 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 MIR378D2-201ENST00000580636 98 ntBASIC2.51□□□□□ -2.01
HERVK_113P62684 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
HERVK_113P62684 Y_RNA.393-201ENST00000383936 102 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 MIR29C-201ENST00000385231 88 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 SNORA12.1-201ENST00000390873 148 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 RNU2-55P-201ENST00000411146 174 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 SNRPGP10-201ENST00000432323 225 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 HMGN1P7-201ENST00000491722 313 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 RNU6-197P-201ENST00000516680 100 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 RNU1-104P-201ENST00000517280 175 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 Pinc.1-201ENST00000616452 154 ntBASIC2.5□□□□□ -2.01
HERVK_113P62684 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HERVK_113P62684 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 Y_RNA.253-201ENST00000364562 112 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 RNU6-484P-201ENST00000384016 107 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 RNU6-588P-201ENST00000410281 105 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.49□□□□□ -2.01
HERVK_113P62684 AC099677.2-201ENST00000436385 175 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 OR9P1P-201ENST00000496431 281 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 SNORD77.4-201ENST00000516158 81 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 RNU7-149P-201ENST00000516739 59 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 AC024995.1-201ENST00000523014 93 ntBASIC2.49□□□□□ -2.01
HERVK_113P62684 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.49□□□□□ -2.01
HERVK_113P62684 AC010332.2-201ENST00000613083 1904 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 MIR126-201ENST00000362291 85 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 RNU1-58P-201ENST00000362413 163 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 MIR562-201ENST00000384894 95 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 U8.13-201ENST00000390842 128 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 AL445646.1-201ENST00000431784 216 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 RNU7-94P-201ENST00000459576 63 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 AC104435.1-201ENST00000483483 166 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 RNU2-56P-201ENST00000516826 190 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.48□□□□□ -2.01
HERVK_113P62684 SNORD14A-201ENST00000606526 91 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.48□□□□□ -2.01
HERVK_113P62684 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HERVK_113P62684 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms