Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 RNU6-1116P-201ENST00000517269 99 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 DEFB117-201ENST00000602356 141 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 AC004832.4-201ENST00000608952 331 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.31□□□□□ -2.2
LIMK1P53667 AC068647.2-201ENST00000637380 353 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 MTND4P29-201ENST00000503122 1372 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 RNU6-1084P-201ENST00000362498 107 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 Y_RNA.61-201ENST00000362835 102 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 SNORD42.2-201ENST00000365570 69 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 Y_RNA.389-201ENST00000383924 113 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 SNORA70.7-201ENST00000384159 133 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 MIR891A-201ENST00000401237 79 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 AL451046.2-201ENST00000403074 277 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 PIGPP3-201ENST00000425307 415 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 DYNLT3P2-201ENST00000442517 295 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 Y_RNA.639-201ENST00000458981 102 ntBASIC1.3□□□□□ -2.2
LIMK1P53667 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.3□□□□□ -2.2
LIMK1P53667 SNORD63-201ENST00000384262 68 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 RNU6-101P-201ENST00000410323 104 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.29□□□□□ -2.2
LIMK1P53667 POLR2KP2-201ENST00000438155 177 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 AC104332.1-201ENST00000440471 797 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 SEPT14P8-201ENST00000508026 178 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.29□□□□□ -2.2
LIMK1P53667 RNU6-397P-201ENST00000516226 104 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 MIR4423-201ENST00000580922 80 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 AL591926.4-201ENST00000616895 298 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 MIR6767-201ENST00000637302 66 ntBASIC1.29□□□□□ -2.2
LIMK1P53667 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 SNORA2.2-201ENST00000365473 135 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 Y_RNA.631-201ENST00000459607 101 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 CYCTP-201ENST00000504253 315 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 AC090049.2-201ENST00000550377 109 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 MIR3145-201ENST00000580727 82 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 AC120024.3-201ENST00000603167 156 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 GHRLOS.1-201ENST00000610995 70 ntBASIC1.28□□□□□ -2.2
LIMK1P53667 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
LIMK1P53667 Y_RNA.28-201ENST00000362554 111 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 Y_RNA.128-201ENST00000363391 112 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 RNU6-474P-201ENST00000384243 107 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 Y_RNA.604-201ENST00000410574 102 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 U8.19-201ENST00000459095 133 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 Y_RNA.714-201ENST00000517065 90 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 POLR3GP1-201ENST00000594073 261 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 SNORD113-5-201ENST00000607261 78 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 PART1_1.1-201ENST00000611761 217 ntBASIC1.27□□□□□ -2.21
LIMK1P53667 MIRLET7C-201ENST00000362160 84 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 SNORD81.1-201ENST00000363064 77 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 RNU6-450P-201ENST00000364654 107 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 SNORA63.7-201ENST00000365579 123 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 Y_RNA.383-201ENST00000383855 97 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 Y_RNA.456-201ENST00000384232 111 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 SNORA72-201ENST00000384339 132 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 Y_RNA.535-201ENST00000384612 99 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 PMCHL1-202ENST00000423102 261 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 MTCO2P12-201ENST00000427426 682 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 AC114811.1-201ENST00000507207 168 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 RNU6-1046P-201ENST00000516538 107 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 RNU7-116P-201ENST00000516940 62 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 Y_RNA.721-201ENST00000517207 102 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.26□□□□□ -2.21
LIMK1P53667 RNU6-833P-201ENST00000363486 107 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 AL590004.1-201ENST00000405321 300 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 Y_RNA.602-201ENST00000410535 92 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 RPL39P39-201ENST00000455840 151 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 RNU6-917P-201ENST00000516294 104 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 RN7SL793P-201ENST00000583259 296 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.25□□□□□ -2.21
LIMK1P53667 MIR376A1-201ENST00000616574 68 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 AC027279.3-201ENST00000625055 122 ntBASIC1.25□□□□□ -2.21
LIMK1P53667 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LIMK1P53667 RNU6-797P-201ENST00000363101 109 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 Y_RNA.148-201ENST00000363557 117 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 Y_RNA.310-201ENST00000365063 113 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 Y_RNA.368-201ENST00000365547 113 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 RNU6-1323P-201ENST00000384025 107 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 RNU6-1248P-201ENST00000391096 64 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 RNU6-130P-201ENST00000411112 103 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 AC117454.1-201ENST00000491120 168 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 RPL23AP54-201ENST00000495129 419 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 SNORA40.15-201ENST00000516884 107 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 Y_RNA.715-201ENST00000517082 110 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 AL357312.1-201ENST00000603879 298 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 AC104695.3-201ENST00000604052 296 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 AC134503.1-201ENST00000633048 54 ntBASIC1.24□□□□□ -2.21
LIMK1P53667 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
LIMK1P53667 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
LIMK1P53667 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LIMK1P53667 SNORD113-8-201ENST00000363497 74 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 Y_RNA.253-201ENST00000364562 112 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 Y_RNA.286-201ENST00000364813 102 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 MIR653-201ENST00000385279 96 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms