Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 MIR196A2-201ENST00000385189 110 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 AC015818.7-201ENST00000428754 109 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 AC087499.7-201ENST00000441958 109 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 SUMO1P2-201ENST00000452524 304 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.5□□□□□ -2.49
NUP98P52948 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.5□□□□□ -2.49
NUP98P52948 AC100830.2-201ENST00000581636 240 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 MIR4424-201ENST00000585257 86 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.5□□□□□ -2.49
NUP98P52948 RNU6-324P-201ENST00000363957 106 ntBASIC-0.51□□□□□ -2.49
NUP98P52948 RNU6-925P-201ENST00000384629 104 ntBASIC-0.51□□□□□ -2.49
NUP98P52948 MTND3P23-201ENST00000431980 347 ntBASIC-0.51□□□□□ -2.49
NUP98P52948 UQCRBP2-201ENST00000447827 297 ntBASIC-0.51□□□□□ -2.49
NUP98P52948 AC093023.1-201ENST00000547375 507 ntBASIC-0.51□□□□□ -2.49
NUP98P52948 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.51□□□□□ -2.49
NUP98P52948 AC121247.2-201ENST00000604776 136 ntBASIC-0.51□□□□□ -2.49
NUP98P52948 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.51□□□□□ -2.49
NUP98P52948 SNORD115-41-201ENST00000363608 82 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNU6-282P-201ENST00000365357 103 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 MIR518F-201ENST00000384973 87 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 PCNPP3-201ENST00000393579 471 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNU6-847P-201ENST00000411115 108 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 MTCO2P8-201ENST00000412213 658 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 AC073415.1-201ENST00000449240 153 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 snoU13.16-201ENST00000459350 104 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
NUP98P52948 AC006380.1-201ENST00000603598 186 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 MIR3666-201ENST00000607845 111 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 U8.5-201ENST00000364528 136 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNU6-127P-201ENST00000390897 107 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNU7-62P-201ENST00000458856 62 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RPL39P34-201ENST00000477141 156 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.52□□□□□ -2.49
NUP98P52948 CCDC34P1-201ENST00000507441 517 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 SNORA25.10-201ENST00000515926 124 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNU7-129P-201ENST00000516128 62 ntBASIC-0.52□□□□□ -2.49
NUP98P52948 RNY1P16-201ENST00000363063 111 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 RNY3-201ENST00000365484 102 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 SNX3P1X-201ENST00000414887 175 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.53□□□□□ -2.49
NUP98P52948 MTND3P16-201ENST00000452205 344 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 RNU7-181P-201ENST00000517234 74 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 MTCO2P4-201ENST00000517968 247 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 RN7SL660P-201ENST00000614852 299 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 MIR499B-201ENST00000636498 73 ntBASIC-0.53□□□□□ -2.49
NUP98P52948 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 POLR2KP2-201ENST00000438155 177 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 ACA59.1-201ENST00000515966 143 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 AC092807.2-201ENST00000609367 243 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 MIR198-201ENST00000637333 62 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 MIR517A-201ENST00000385001 87 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 MIR802-201ENST00000390235 94 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.54□□□□□ -2.5
NUP98P52948 snoU13.2-201ENST00000459201 104 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 RNU6-138P-201ENST00000515952 107 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 Z94722.1-201ENST00000604328 474 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 AL121757.2-201ENST00000611223 313 ntBASIC-0.54□□□□□ -2.5
NUP98P52948 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 MIR513B-201ENST00000385136 84 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 RNU6-159P-201ENST00000391080 106 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 AC134698.4-201ENST00000523451 826 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 MIR3913-1-201ENST00000577744 102 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 AL355297.3-201ENST00000604082 446 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 AF246928.1-201ENST00000623768 87 ntBASIC-0.55□□□□□ -2.5
NUP98P52948 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 SNORA63C-201ENST00000364578 129 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 MIR873-201ENST00000401120 77 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 RNA5SP163-201ENST00000410304 99 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 MTND2P18-201ENST00000419962 1030 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 RNU6-1038P-201ENST00000516516 104 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 AC090616.2-202ENST00000584248 222 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 AC087685.1-201ENST00000587507 141 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 AL162726.3-218ENST00000636401 95 ntBASIC-0.56□□□□□ -2.5
NUP98P52948 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 CYCSP46-201ENST00000423569 204 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 RNU6-329P-201ENST00000459618 107 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 RNU6-311P-201ENST00000516224 102 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 RNU6-830P-201ENST00000516353 107 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 RNU6-180P-201ENST00000516697 61 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 RNU6-135P-201ENST00000516769 101 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 NAMPTP3-201ENST00000569273 224 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 POLR3GP1-201ENST00000594073 261 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 MIR6740-201ENST00000618268 113 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 AC091304.10-201ENST00000641554 121 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 SNORA51.10-201ENST00000384418 136 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.57□□□□□ -2.5
NUP98P52948 SNRPGP10-201ENST00000432323 225 ntBASIC-0.57□□□□□ -2.5
NUP98P52948 MTATP6P23-201ENST00000440153 476 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms