Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
MRE11P49959 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
MRE11P49959 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
MRE11P49959 RNU4-13P-201ENST00000364019 141 ntBASIC2.63□□□□□ -1.99
MRE11P49959 Y_RNA.374-201ENST00000365606 101 ntBASIC2.63□□□□□ -1.99
MRE11P49959 RNU4-43P-201ENST00000410628 137 ntBASIC2.63□□□□□ -1.99
MRE11P49959 RN7SKP101-201ENST00000411376 320 ntBASIC2.63□□□□□ -1.99
MRE11P49959 AC108667.1-201ENST00000428618 249 ntBASIC2.63□□□□□ -1.99
MRE11P49959 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.63□□□□□ -1.99
MRE11P49959 AC097462.1-201ENST00000514125 324 ntBASIC2.63□□□□□ -1.99
MRE11P49959 SNORA25.12-201ENST00000516202 82 ntBASIC2.63□□□□□ -1.99
MRE11P49959 RNU6-856P-201ENST00000516959 98 ntBASIC2.63□□□□□ -1.99
MRE11P49959 MIR4438-201ENST00000585271 93 ntBASIC2.63□□□□□ -1.99
MRE11P49959 AC010332.2-201ENST00000613083 1904 ntBASIC2.63□□□□□ -1.99
MRE11P49959 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
MRE11P49959 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
MRE11P49959 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.62□□□□□ -1.99
MRE11P49959 SNORA72-201ENST00000384339 132 ntBASIC2.62□□□□□ -1.99
MRE11P49959 RNU6-22P-201ENST00000384355 107 ntBASIC2.62□□□□□ -1.99
MRE11P49959 RNU6-136P-201ENST00000384663 107 ntBASIC2.62□□□□□ -1.99
MRE11P49959 RNA5SP496-201ENST00000391240 109 ntBASIC2.62□□□□□ -1.99
MRE11P49959 MIR513C-201ENST00000401352 84 ntBASIC2.62□□□□□ -1.99
MRE11P49959 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.62□□□□□ -1.99
MRE11P49959 SNORA4.4-201ENST00000515921 135 ntBASIC2.62□□□□□ -1.99
MRE11P49959 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.62□□□□□ -1.99
MRE11P49959 SNORA4-201ENST00000584302 138 ntBASIC2.62□□□□□ -1.99
MRE11P49959 AL355297.2-201ENST00000604792 129 ntBASIC2.62□□□□□ -1.99
MRE11P49959 AL021707.8-201ENST00000609428 183 ntBASIC2.62□□□□□ -1.99
MRE11P49959 U2.20-201ENST00000613956 192 ntBASIC2.62□□□□□ -1.99
MRE11P49959 AC100821.1-201ENST00000523153 2479 ntBASIC2.62□□□□□ -1.99
MRE11P49959 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
MRE11P49959 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
MRE11P49959 RNU6-199P-201ENST00000362954 107 ntBASIC2.61□□□□□ -1.99
MRE11P49959 SNORD45.3-201ENST00000363836 72 ntBASIC2.61□□□□□ -1.99
MRE11P49959 RNU4-41P-201ENST00000364426 143 ntBASIC2.61□□□□□ -1.99
MRE11P49959 RNU2-51P-201ENST00000410708 197 ntBASIC2.61□□□□□ -1.99
MRE11P49959 RPL30P13-201ENST00000418873 348 ntBASIC2.61□□□□□ -1.99
MRE11P49959 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
MRE11P49959 RNU7-172P-201ENST00000517125 64 ntBASIC2.61□□□□□ -1.99
MRE11P49959 MIR4448-201ENST00000584360 86 ntBASIC2.61□□□□□ -1.99
MRE11P49959 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.61□□□□□ -1.99
MRE11P49959 AL929325.1-201ENST00000603096 117 ntBASIC2.61□□□□□ -1.99
MRE11P49959 ZNF702P-202ENST00000434269 1966 ntBASIC2.61□□□□□ -1.99
MRE11P49959 RNU1-91P-201ENST00000364746 163 ntBASIC2.6□□□□□ -1.99
MRE11P49959 RNU6-768P-201ENST00000384683 107 ntBASIC2.6□□□□□ -1.99
MRE11P49959 RNU6-417P-201ENST00000384712 107 ntBASIC2.6□□□□□ -1.99
MRE11P49959 MIR561-201ENST00000385216 97 ntBASIC2.6□□□□□ -1.99
MRE11P49959 SNORA40-201ENST00000388090 126 ntBASIC2.6□□□□□ -1.99
MRE11P49959 AL512604.1-201ENST00000404812 257 ntBASIC2.6□□□□□ -1.99
MRE11P49959 Y_RNA.622-201ENST00000411091 108 ntBASIC2.6□□□□□ -1.99
MRE11P49959 AC060773.1-201ENST00000421698 310 ntBASIC2.6□□□□□ -1.99
MRE11P49959 RPS4XP11-201ENST00000446897 772 ntBASIC2.6□□□□□ -1.99
MRE11P49959 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.6□□□□□ -1.99
MRE11P49959 SNRPGP8-201ENST00000454064 226 ntBASIC2.6□□□□□ -1.99
MRE11P49959 AC018868.1-201ENST00000491307 315 ntBASIC2.6□□□□□ -1.99
MRE11P49959 RNU6-479P-201ENST00000516348 105 ntBASIC2.6□□□□□ -1.99
MRE11P49959 RNU6-62P-201ENST00000516526 102 ntBASIC2.6□□□□□ -1.99
MRE11P49959 RNU6-295P-201ENST00000516901 104 ntBASIC2.6□□□□□ -1.99
MRE11P49959 AC112693.2-201ENST00000556538 232 ntBASIC2.6□□□□□ -1.99
MRE11P49959 AC078899.2-201ENST00000595282 212 ntBASIC2.6□□□□□ -1.99
MRE11P49959 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
MRE11P49959 SNORD37.2-201ENST00000391075 66 ntBASIC2.59□□□□□ -1.99
MRE11P49959 Y_RNA.587-201ENST00000391210 103 ntBASIC2.59□□□□□ -1.99
MRE11P49959 MIR1253-201ENST00000408273 105 ntBASIC2.59□□□□□ -1.99
MRE11P49959 MTND4LP9-201ENST00000427694 174 ntBASIC2.59□□□□□ -1.99
MRE11P49959 AC245102.2-201ENST00000448956 180 ntBASIC2.59□□□□□ -1.99
MRE11P49959 RPS27P1-201ENST00000450552 247 ntBASIC2.59□□□□□ -1.99
MRE11P49959 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.59□□□□□ -1.99
MRE11P49959 RNU6-667P-201ENST00000517186 102 ntBASIC2.59□□□□□ -1.99
MRE11P49959 MIR3646-201ENST00000578301 84 ntBASIC2.59□□□□□ -1.99
MRE11P49959 MIR6779-201ENST00000617283 64 ntBASIC2.59□□□□□ -1.99
MRE11P49959 U6.73-201ENST00000619194 103 ntBASIC2.59□□□□□ -1.99
MRE11P49959 MIR6766-201ENST00000622641 72 ntBASIC2.59□□□□□ -1.99
MRE11P49959 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
MRE11P49959 RNA5SP125-201ENST00000364843 120 ntBASIC2.58□□□□□ -2
MRE11P49959 Y_RNA.393-201ENST00000383936 102 ntBASIC2.58□□□□□ -2
MRE11P49959 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
MRE11P49959 Y_RNA.521-201ENST00000384560 114 ntBASIC2.58□□□□□ -2
MRE11P49959 SNORA20-201ENST00000384662 132 ntBASIC2.58□□□□□ -2
MRE11P49959 SNORA26.9-201ENST00000391322 122 ntBASIC2.58□□□□□ -2
MRE11P49959 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.58□□□□□ -2
MRE11P49959 RNU7-197P-201ENST00000458836 62 ntBASIC2.58□□□□□ -2
MRE11P49959 AC025033.1-201ENST00000463883 194 ntBASIC2.58□□□□□ -2
MRE11P49959 RNU1-40P-201ENST00000516816 164 ntBASIC2.58□□□□□ -2
MRE11P49959 RNU1-97P-201ENST00000516872 164 ntBASIC2.58□□□□□ -2
MRE11P49959 MIR5002-201ENST00000584713 97 ntBASIC2.58□□□□□ -2
MRE11P49959 AC002984.1-201ENST00000591692 448 ntBASIC2.58□□□□□ -2
MRE11P49959 AL031274.2-201ENST00000599419 203 ntBASIC2.58□□□□□ -2
MRE11P49959 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.58□□□□□ -2
MRE11P49959 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.57□□□□□ -2
MRE11P49959 AL596028.1-201ENST00000326971 197 ntBASIC2.57□□□□□ -2
MRE11P49959 MIR378A-201ENST00000362177 66 ntBASIC2.57□□□□□ -2
MRE11P49959 Y_RNA.203-201ENST00000364106 102 ntBASIC2.57□□□□□ -2
MRE11P49959 Y_RNA.420-201ENST00000384043 110 ntBASIC2.57□□□□□ -2
MRE11P49959 RNU6-1154P-201ENST00000391001 104 ntBASIC2.57□□□□□ -2
MRE11P49959 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
MRE11P49959 HMGN2P34-201ENST00000437647 269 ntBASIC2.57□□□□□ -2
MRE11P49959 AL021397.1-201ENST00000451806 248 ntBASIC2.57□□□□□ -2
MRE11P49959 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
MRE11P49959 TRMT112P2-201ENST00000512910 132 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms