Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.81□□□□□ -2.12
RFX2P48378 RNU6-643P-201ENST00000384018 107 ntBASIC1.81□□□□□ -2.12
RFX2P48378 RNY3P5-201ENST00000384127 102 ntBASIC1.81□□□□□ -2.12
RFX2P48378 MIR221-201ENST00000385135 110 ntBASIC1.81□□□□□ -2.12
RFX2P48378 SNORA12.1-201ENST00000390873 148 ntBASIC1.81□□□□□ -2.12
RFX2P48378 RNU6-239P-201ENST00000390990 99 ntBASIC1.81□□□□□ -2.12
RFX2P48378 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
RFX2P48378 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RFX2P48378 MLLT10P1-201ENST00000418346 262 ntBASIC1.81□□□□□ -2.12
RFX2P48378 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
RFX2P48378 SNRPGP10-201ENST00000432323 225 ntBASIC1.81□□□□□ -2.12
RFX2P48378 RNU7-94P-201ENST00000459576 63 ntBASIC1.81□□□□□ -2.12
RFX2P48378 HMGN1P7-201ENST00000491722 313 ntBASIC1.81□□□□□ -2.12
RFX2P48378 RNU7-193P-201ENST00000516723 65 ntBASIC1.81□□□□□ -2.12
RFX2P48378 RNU2-56P-201ENST00000516826 190 ntBASIC1.81□□□□□ -2.12
RFX2P48378 uc_338.4-201ENST00000616635 176 ntBASIC1.81□□□□□ -2.12
RFX2P48378 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
RFX2P48378 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RFX2P48378 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.81□□□□□ -2.12
RFX2P48378 RNU6-449P-201ENST00000383914 107 ntBASIC1.8□□□□□ -2.12
RFX2P48378 MIR562-201ENST00000384894 95 ntBASIC1.8□□□□□ -2.12
RFX2P48378 Y_RNA.580-201ENST00000391004 95 ntBASIC1.8□□□□□ -2.12
RFX2P48378 RNA5SP465-201ENST00000391195 109 ntBASIC1.8□□□□□ -2.12
RFX2P48378 Z92545.1-201ENST00000411782 234 ntBASIC1.8□□□□□ -2.12
RFX2P48378 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.8□□□□□ -2.12
RFX2P48378 AC245047.4-201ENST00000433189 144 ntBASIC1.8□□□□□ -2.12
RFX2P48378 RPS27P1-201ENST00000450552 247 ntBASIC1.8□□□□□ -2.12
RFX2P48378 AC023449.1-201ENST00000454464 154 ntBASIC1.8□□□□□ -2.12
RFX2P48378 AL049830.1-201ENST00000468034 425 ntBASIC1.8□□□□□ -2.12
RFX2P48378 NDUFA4P2-201ENST00000489989 244 ntBASIC1.8□□□□□ -2.12
RFX2P48378 AP002004.2-201ENST00000531656 154 ntBASIC1.8□□□□□ -2.12
RFX2P48378 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.8□□□□□ -2.12
RFX2P48378 AL591926.4-201ENST00000616895 298 ntBASIC1.8□□□□□ -2.12
RFX2P48378 MIR3658-201ENST00000636291 56 ntBASIC1.8□□□□□ -2.12
RFX2P48378 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RFX2P48378 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RFX2P48378 MIR126-201ENST00000362291 85 ntBASIC1.79□□□□□ -2.12
RFX2P48378 RNU6-151P-201ENST00000364158 107 ntBASIC1.79□□□□□ -2.12
RFX2P48378 RNU6-1019P-201ENST00000364424 107 ntBASIC1.79□□□□□ -2.12
RFX2P48378 SNORD23.1-201ENST00000408212 104 ntBASIC1.79□□□□□ -2.12
RFX2P48378 RNA5SP501-201ENST00000410990 112 ntBASIC1.79□□□□□ -2.12
RFX2P48378 RNA5SP184-201ENST00000411071 108 ntBASIC1.79□□□□□ -2.12
RFX2P48378 SNORD77.4-201ENST00000516158 81 ntBASIC1.79□□□□□ -2.12
RFX2P48378 AC006386.2-201ENST00000624491 75 ntBASIC1.79□□□□□ -2.12
RFX2P48378 AC012005.1-201ENST00000624575 75 ntBASIC1.79□□□□□ -2.12
RFX2P48378 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RFX2P48378 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
RFX2P48378 ZNF702P-202ENST00000434269 1966 ntBASIC1.78□□□□□ -2.12
RFX2P48378 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
RFX2P48378 SNORD68-201ENST00000363214 84 ntBASIC1.78□□□□□ -2.12
RFX2P48378 RNY1P5-201ENST00000383890 115 ntBASIC1.78□□□□□ -2.12
RFX2P48378 RNU6-484P-201ENST00000384016 107 ntBASIC1.78□□□□□ -2.12
RFX2P48378 Y_RNA.432-201ENST00000384087 111 ntBASIC1.78□□□□□ -2.12
RFX2P48378 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
RFX2P48378 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX2P48378 RNU6-1299P-201ENST00000516316 100 ntBASIC1.78□□□□□ -2.12
RFX2P48378 SNORD116-25-201ENST00000516517 92 ntBASIC1.78□□□□□ -2.12
RFX2P48378 RNU7-121P-201ENST00000516604 62 ntBASIC1.78□□□□□ -2.12
RFX2P48378 RNU7-149P-201ENST00000516739 59 ntBASIC1.78□□□□□ -2.12
RFX2P48378 AL358944.1-201ENST00000528537 144 ntBASIC1.78□□□□□ -2.12
RFX2P48378 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.78□□□□□ -2.12
RFX2P48378 Pinc.1-201ENST00000616452 154 ntBASIC1.78□□□□□ -2.12
RFX2P48378 CTSLP2-204ENST00000629029 392 ntBASIC1.78□□□□□ -2.12
RFX2P48378 MTND1P7-201ENST00000632801 297 ntBASIC1.78□□□□□ -2.12
RFX2P48378 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
RFX2P48378 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
RFX2P48378 Y_RNA.91-201ENST00000363042 107 ntBASIC1.77□□□□□ -2.13
RFX2P48378 Y_RNA.337-201ENST00000365312 102 ntBASIC1.77□□□□□ -2.13
RFX2P48378 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RFX2P48378 SNORA79-201ENST00000408376 140 ntBASIC1.77□□□□□ -2.13
RFX2P48378 RNU4-43P-201ENST00000410628 137 ntBASIC1.77□□□□□ -2.13
RFX2P48378 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
RFX2P48378 RNA5SP356-201ENST00000515972 94 ntBASIC1.77□□□□□ -2.13
RFX2P48378 RNA5SP281-201ENST00000516504 135 ntBASIC1.77□□□□□ -2.13
RFX2P48378 SNORA31.25-201ENST00000517242 134 ntBASIC1.77□□□□□ -2.13
RFX2P48378 MIR3200-201ENST00000580767 85 ntBASIC1.77□□□□□ -2.13
RFX2P48378 Y_RNA.778-201ENST00000620203 90 ntBASIC1.77□□□□□ -2.13
RFX2P48378 MIR8054-201ENST00000620877 86 ntBASIC1.77□□□□□ -2.13
RFX2P48378 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RFX2P48378 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFX2P48378 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFX2P48378 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
RFX2P48378 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RFX2P48378 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
RFX2P48378 Y_RNA.265-201ENST00000364677 108 ntBASIC1.76□□□□□ -2.13
RFX2P48378 RNU4-11P-201ENST00000365287 132 ntBASIC1.76□□□□□ -2.13
RFX2P48378 SNORA4.2-201ENST00000365313 147 ntBASIC1.76□□□□□ -2.13
RFX2P48378 Y_RNA.400-201ENST00000383963 111 ntBASIC1.76□□□□□ -2.13
RFX2P48378 Y_RNA.521-201ENST00000384560 114 ntBASIC1.76□□□□□ -2.13
RFX2P48378 RNU6-768P-201ENST00000384683 107 ntBASIC1.76□□□□□ -2.13
RFX2P48378 MIR522-201ENST00000385071 87 ntBASIC1.76□□□□□ -2.13
RFX2P48378 SNORA48.1-201ENST00000390879 135 ntBASIC1.76□□□□□ -2.13
RFX2P48378 RNU6-440P-201ENST00000390882 105 ntBASIC1.76□□□□□ -2.13
RFX2P48378 SNORD72-201ENST00000390994 80 ntBASIC1.76□□□□□ -2.13
RFX2P48378 RNU6-131P-201ENST00000391144 107 ntBASIC1.76□□□□□ -2.13
RFX2P48378 RNU2-70P-201ENST00000410718 179 ntBASIC1.76□□□□□ -2.13
RFX2P48378 RNA5SP450-201ENST00000411206 102 ntBASIC1.76□□□□□ -2.13
RFX2P48378 CYCSP49-201ENST00000420810 319 ntBASIC1.76□□□□□ -2.13
RFX2P48378 HSPE1P9-201ENST00000440046 311 ntBASIC1.76□□□□□ -2.13
RFX2P48378 STAG3L5P-204ENST00000443759 179 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms