Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
HADHAP40939 AC127455.1-201ENST00000565496 145 ntBASIC1.36□□□□□ -2.19
HADHAP40939 AC136932.1-201ENST00000574771 208 ntBASIC1.36□□□□□ -2.19
HADHAP40939 MIR4300-201ENST00000581016 96 ntBASIC1.36□□□□□ -2.19
HADHAP40939 RNU4-90P-201ENST00000362773 141 ntBASIC1.35□□□□□ -2.19
HADHAP40939 Y_RNA.136-201ENST00000363444 102 ntBASIC1.35□□□□□ -2.19
HADHAP40939 Y_RNA.152-201ENST00000363578 100 ntBASIC1.35□□□□□ -2.19
HADHAP40939 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
HADHAP40939 SNORD41-201ENST00000386967 70 ntBASIC1.35□□□□□ -2.19
HADHAP40939 RNU6-131P-201ENST00000391144 107 ntBASIC1.35□□□□□ -2.19
HADHAP40939 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.35□□□□□ -2.19
HADHAP40939 RNU7-115P-201ENST00000516433 55 ntBASIC1.35□□□□□ -2.19
HADHAP40939 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
HADHAP40939 MIR2681-201ENST00000581814 105 ntBASIC1.35□□□□□ -2.19
HADHAP40939 AL355297.3-201ENST00000604082 446 ntBASIC1.35□□□□□ -2.19
HADHAP40939 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HADHAP40939 Y_RNA.11-201ENST00000362375 109 ntBASIC1.34□□□□□ -2.19
HADHAP40939 SNORD113-8-201ENST00000363497 74 ntBASIC1.34□□□□□ -2.19
HADHAP40939 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
HADHAP40939 snoU2-30.1-201ENST00000365012 70 ntBASIC1.34□□□□□ -2.19
HADHAP40939 SNORA22B-201ENST00000383876 138 ntBASIC1.34□□□□□ -2.19
HADHAP40939 AL590004.1-201ENST00000405321 300 ntBASIC1.34□□□□□ -2.19
HADHAP40939 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
HADHAP40939 AC114811.1-201ENST00000507207 168 ntBASIC1.34□□□□□ -2.19
HADHAP40939 SNORA31.4-201ENST00000516049 129 ntBASIC1.34□□□□□ -2.19
HADHAP40939 RNU6-1143P-201ENST00000516125 104 ntBASIC1.34□□□□□ -2.19
HADHAP40939 RNU6-1046P-201ENST00000516538 107 ntBASIC1.34□□□□□ -2.19
HADHAP40939 RNU6-897P-201ENST00000517135 105 ntBASIC1.34□□□□□ -2.19
HADHAP40939 RNU6-165P-201ENST00000517170 99 ntBASIC1.34□□□□□ -2.19
HADHAP40939 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.34□□□□□ -2.19
HADHAP40939 MIR548AY-201ENST00000617669 107 ntBASIC1.34□□□□□ -2.19
HADHAP40939 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
HADHAP40939 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HADHAP40939 RNU6-1084P-201ENST00000362498 107 ntBASIC1.33□□□□□ -2.2
HADHAP40939 Y_RNA.202-201ENST00000364083 110 ntBASIC1.33□□□□□ -2.2
HADHAP40939 Y_RNA.203-201ENST00000364106 102 ntBASIC1.33□□□□□ -2.2
HADHAP40939 Y_RNA.242-201ENST00000364473 110 ntBASIC1.33□□□□□ -2.2
HADHAP40939 Y_RNA.455-201ENST00000384230 98 ntBASIC1.33□□□□□ -2.2
HADHAP40939 SNRPGP10-201ENST00000432323 225 ntBASIC1.33□□□□□ -2.2
HADHAP40939 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
HADHAP40939 AC104332.1-201ENST00000440471 797 ntBASIC1.33□□□□□ -2.2
HADHAP40939 LINC01399-202ENST00000458450 244 ntBASIC1.33□□□□□ -2.2
HADHAP40939 RNU6-496P-201ENST00000516145 99 ntBASIC1.33□□□□□ -2.2
HADHAP40939 RNU6-1007P-201ENST00000516586 107 ntBASIC1.33□□□□□ -2.2
HADHAP40939 SNORA40.15-201ENST00000516884 107 ntBASIC1.33□□□□□ -2.2
HADHAP40939 AC024405.2-202ENST00000532731 184 ntBASIC1.33□□□□□ -2.2
HADHAP40939 RAC1P9-201ENST00000604990 392 ntBASIC1.33□□□□□ -2.2
HADHAP40939 AL353770.2-201ENST00000620024 78 ntBASIC1.33□□□□□ -2.2
HADHAP40939 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
HADHAP40939 RNU6-969P-201ENST00000383900 105 ntBASIC1.32□□□□□ -2.2
HADHAP40939 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
HADHAP40939 Y_RNA.581-201ENST00000391017 97 ntBASIC1.32□□□□□ -2.2
HADHAP40939 PIGPP3-201ENST00000425307 415 ntBASIC1.32□□□□□ -2.2
HADHAP40939 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
HADHAP40939 RPL23AP54-201ENST00000495129 419 ntBASIC1.32□□□□□ -2.2
HADHAP40939 SNORD45.4-201ENST00000516629 73 ntBASIC1.32□□□□□ -2.2
HADHAP40939 RNU6-1116P-201ENST00000517269 99 ntBASIC1.32□□□□□ -2.2
HADHAP40939 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.32□□□□□ -2.2
HADHAP40939 MIR3171-201ENST00000584270 74 ntBASIC1.32□□□□□ -2.2
HADHAP40939 JPX_2.1-201ENST00000614161 69 ntBASIC1.32□□□□□ -2.2
HADHAP40939 AL157834.3-201ENST00000615543 103 ntBASIC1.32□□□□□ -2.2
HADHAP40939 Y_RNA.138-201ENST00000363462 102 ntBASIC1.31□□□□□ -2.2
HADHAP40939 Y_RNA.226-201ENST00000364337 114 ntBASIC1.31□□□□□ -2.2
HADHAP40939 Y_RNA.286-201ENST00000364813 102 ntBASIC1.31□□□□□ -2.2
HADHAP40939 Y_RNA.394-201ENST00000383942 103 ntBASIC1.31□□□□□ -2.2
HADHAP40939 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.31□□□□□ -2.2
HADHAP40939 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.31□□□□□ -2.2
HADHAP40939 DYNLT3P2-201ENST00000442517 295 ntBASIC1.31□□□□□ -2.2
HADHAP40939 RNU6-397P-201ENST00000516226 104 ntBASIC1.31□□□□□ -2.2
HADHAP40939 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
HADHAP40939 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.31□□□□□ -2.2
HADHAP40939 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.31□□□□□ -2.2
HADHAP40939 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.31□□□□□ -2.2
HADHAP40939 RNU4-80P-201ENST00000363200 141 ntBASIC1.3□□□□□ -2.2
HADHAP40939 RNU6-674P-201ENST00000363831 107 ntBASIC1.3□□□□□ -2.2
HADHAP40939 RNU6-450P-201ENST00000364654 107 ntBASIC1.3□□□□□ -2.2
HADHAP40939 U8.7-201ENST00000364940 136 ntBASIC1.3□□□□□ -2.2
HADHAP40939 SNORA72.4-201ENST00000384174 132 ntBASIC1.3□□□□□ -2.2
HADHAP40939 MIR136-201ENST00000385207 82 ntBASIC1.3□□□□□ -2.2
HADHAP40939 MIR1298-201ENST00000408783 112 ntBASIC1.3□□□□□ -2.2
HADHAP40939 MLLT10P1-201ENST00000418346 262 ntBASIC1.3□□□□□ -2.2
HADHAP40939 HSPE1P25-201ENST00000455484 251 ntBASIC1.3□□□□□ -2.2
HADHAP40939 AC117454.1-201ENST00000491120 168 ntBASIC1.3□□□□□ -2.2
HADHAP40939 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.3□□□□□ -2.2
HADHAP40939 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
HADHAP40939 MIR3145-201ENST00000580727 82 ntBASIC1.3□□□□□ -2.2
HADHAP40939 AC037487.3-201ENST00000606668 112 ntBASIC1.3□□□□□ -2.2
HADHAP40939 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.3□□□□□ -2.2
HADHAP40939 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
HADHAP40939 Y_RNA.569-201ENST00000384749 103 ntBASIC1.29□□□□□ -2.2
HADHAP40939 MIR526A1-201ENST00000384897 85 ntBASIC1.29□□□□□ -2.2
HADHAP40939 RNU6-437P-201ENST00000459408 95 ntBASIC1.29□□□□□ -2.2
HADHAP40939 AC010655.3-201ENST00000478818 450 ntBASIC1.29□□□□□ -2.2
HADHAP40939 RNU6-191P-201ENST00000516295 94 ntBASIC1.29□□□□□ -2.2
HADHAP40939 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.29□□□□□ -2.2
HADHAP40939 AC020661.2-201ENST00000560114 134 ntBASIC1.29□□□□□ -2.2
HADHAP40939 MIR8070-201ENST00000616510 88 ntBASIC1.29□□□□□ -2.2
HADHAP40939 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
HADHAP40939 RNU6-770P-201ENST00000363929 105 ntBASIC1.28□□□□□ -2.2
HADHAP40939 RNU6-899P-201ENST00000363947 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms