Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LTBRP36941 RNU6-978P-201ENST00000364371 103 ntBASIC2.58□□□□□ -2
LTBRP36941 SNORA25.7-201ENST00000364375 127 ntBASIC2.58□□□□□ -2
LTBRP36941 RNU6-1336P-201ENST00000383886 109 ntBASIC2.58□□□□□ -2
LTBRP36941 Y_RNA.486-201ENST00000384398 107 ntBASIC2.58□□□□□ -2
LTBRP36941 RNU6-460P-201ENST00000391158 108 ntBASIC2.58□□□□□ -2
LTBRP36941 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.58□□□□□ -2
LTBRP36941 RNA5SP458-201ENST00000516188 119 ntBASIC2.58□□□□□ -2
LTBRP36941 RNU6-126P-201ENST00000516685 103 ntBASIC2.58□□□□□ -2
LTBRP36941 RNA5SP137-201ENST00000516833 135 ntBASIC2.58□□□□□ -2
LTBRP36941 AC090142.3-201ENST00000519012 385 ntBASIC2.58□□□□□ -2
LTBRP36941 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.58□□□□□ -2
LTBRP36941 MIR548AI-201ENST00000579940 88 ntBASIC2.58□□□□□ -2
LTBRP36941 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LTBRP36941 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LTBRP36941 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
LTBRP36941 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
LTBRP36941 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
LTBRP36941 Y_RNA.542-201ENST00000384641 111 ntBASIC2.57□□□□□ -2
LTBRP36941 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.57□□□□□ -2
LTBRP36941 RN7SL75P-201ENST00000461926 281 ntBASIC2.57□□□□□ -2
LTBRP36941 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
LTBRP36941 MRPS17P9-201ENST00000511924 393 ntBASIC2.57□□□□□ -2
LTBRP36941 AC097639.2-201ENST00000603159 172 ntBASIC2.57□□□□□ -2
LTBRP36941 AC022217.4-201ENST00000604389 163 ntBASIC2.57□□□□□ -2
LTBRP36941 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
LTBRP36941 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.57□□□□□ -2
LTBRP36941 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LTBRP36941 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LTBRP36941 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.57□□□□□ -2
LTBRP36941 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
LTBRP36941 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
LTBRP36941 RNY1P11-201ENST00000363759 113 ntBASIC2.56□□□□□ -2
LTBRP36941 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
LTBRP36941 RNU6-1081P-201ENST00000384537 107 ntBASIC2.56□□□□□ -2
LTBRP36941 MIR597-201ENST00000384968 97 ntBASIC2.56□□□□□ -2
LTBRP36941 RNU11-3P-201ENST00000391111 133 ntBASIC2.56□□□□□ -2
LTBRP36941 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.56□□□□□ -2
LTBRP36941 RN7SKP123-201ENST00000410732 291 ntBASIC2.56□□□□□ -2
LTBRP36941 Y_RNA.714-201ENST00000517065 90 ntBASIC2.56□□□□□ -2
LTBRP36941 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LTBRP36941 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LTBRP36941 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LTBRP36941 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
LTBRP36941 SNORD68-201ENST00000363214 84 ntBASIC2.55□□□□□ -2
LTBRP36941 SNORD72-201ENST00000390994 80 ntBASIC2.55□□□□□ -2
LTBRP36941 RNA5SP109-201ENST00000391010 116 ntBASIC2.55□□□□□ -2
LTBRP36941 AC245047.3-201ENST00000429428 127 ntBASIC2.55□□□□□ -2
LTBRP36941 AL606517.2-201ENST00000442855 241 ntBASIC2.55□□□□□ -2
LTBRP36941 AP004217.1-201ENST00000480579 346 ntBASIC2.55□□□□□ -2
LTBRP36941 RNU6-62P-201ENST00000516526 102 ntBASIC2.55□□□□□ -2
LTBRP36941 RNU6-365P-201ENST00000517113 106 ntBASIC2.55□□□□□ -2
LTBRP36941 AC008507.4-201ENST00000585464 127 ntBASIC2.55□□□□□ -2
LTBRP36941 AC069114.2-201ENST00000604699 304 ntBASIC2.55□□□□□ -2
LTBRP36941 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LTBRP36941 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.54□□□□□ -2
LTBRP36941 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
LTBRP36941 Y_RNA.251-201ENST00000364551 99 ntBASIC2.54□□□□□ -2
LTBRP36941 RNU6-22P-201ENST00000384355 107 ntBASIC2.54□□□□□ -2
LTBRP36941 MIR522-201ENST00000385071 87 ntBASIC2.54□□□□□ -2
LTBRP36941 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.54□□□□□ -2
LTBRP36941 Y_RNA.584-201ENST00000391090 114 ntBASIC2.54□□□□□ -2
LTBRP36941 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.54□□□□□ -2
LTBRP36941 RNU6-971P-201ENST00000516920 106 ntBASIC2.54□□□□□ -2
LTBRP36941 MIR5094-201ENST00000578766 85 ntBASIC2.54□□□□□ -2
LTBRP36941 AC087685.1-201ENST00000587507 141 ntBASIC2.54□□□□□ -2
LTBRP36941 AC093831.2-201ENST00000624393 3427 ntBASIC2.54□□□□□ -2
LTBRP36941 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
LTBRP36941 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
LTBRP36941 Y_RNA.4-201ENST00000362333 112 ntBASIC2.53□□□□□ -2
LTBRP36941 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
LTBRP36941 RNU6-1019P-201ENST00000364424 107 ntBASIC2.53□□□□□ -2
LTBRP36941 Y_RNA.265-201ENST00000364677 108 ntBASIC2.53□□□□□ -2
LTBRP36941 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
LTBRP36941 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
LTBRP36941 FTH1P12-201ENST00000432137 551 ntBASIC2.53□□□□□ -2
LTBRP36941 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.53□□□□□ -2
LTBRP36941 AP001328.1-201ENST00000528550 176 ntBASIC2.53□□□□□ -2
LTBRP36941 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
LTBRP36941 TUG1_4.1-201ENST00000619464 181 ntBASIC2.53□□□□□ -2
LTBRP36941 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
LTBRP36941 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LTBRP36941 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LTBRP36941 Y_RNA.66-201ENST00000362862 102 ntBASIC2.52□□□□□ -2.01
LTBRP36941 MIR802-201ENST00000390235 94 ntBASIC2.52□□□□□ -2.01
LTBRP36941 MIR1283-2-201ENST00000408621 87 ntBASIC2.52□□□□□ -2.01
LTBRP36941 RNU2-51P-201ENST00000410708 197 ntBASIC2.52□□□□□ -2.01
LTBRP36941 RNU6-1211P-201ENST00000459179 105 ntBASIC2.52□□□□□ -2.01
LTBRP36941 AC026436.1-201ENST00000510537 270 ntBASIC2.52□□□□□ -2.01
LTBRP36941 RNU6-504P-201ENST00000516568 104 ntBASIC2.52□□□□□ -2.01
LTBRP36941 AC011603.4-201ENST00000611325 277 ntBASIC2.52□□□□□ -2.01
LTBRP36941 AL365222.1-201ENST00000614661 98 ntBASIC2.52□□□□□ -2.01
LTBRP36941 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LTBRP36941 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LTBRP36941 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LTBRP36941 Y_RNA.164-201ENST00000363709 102 ntBASIC2.51□□□□□ -2.01
LTBRP36941 MIR539-201ENST00000365690 78 ntBASIC2.51□□□□□ -2.01
LTBRP36941 RNU6-1154P-201ENST00000391001 104 ntBASIC2.51□□□□□ -2.01
LTBRP36941 RNU6-479P-201ENST00000516348 105 ntBASIC2.51□□□□□ -2.01
LTBRP36941 AC007751.1-201ENST00000529260 376 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms