Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.4□□□□□ -2.18
CDH3P22223 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CDH3P22223 MIRLET7C-201ENST00000362160 84 ntBASIC1.4□□□□□ -2.19
CDH3P22223 Y_RNA.145-201ENST00000363527 102 ntBASIC1.4□□□□□ -2.19
CDH3P22223 RNU6-1048P-201ENST00000364054 107 ntBASIC1.4□□□□□ -2.19
CDH3P22223 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
CDH3P22223 SNORA72-201ENST00000384339 132 ntBASIC1.4□□□□□ -2.19
CDH3P22223 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
CDH3P22223 RNA5SP482-201ENST00000391269 118 ntBASIC1.4□□□□□ -2.19
CDH3P22223 U8.16-201ENST00000391279 133 ntBASIC1.4□□□□□ -2.19
CDH3P22223 AC104332.1-201ENST00000440471 797 ntBASIC1.4□□□□□ -2.19
CDH3P22223 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
CDH3P22223 Y_RNA.676-201ENST00000516393 96 ntBASIC1.4□□□□□ -2.19
CDH3P22223 RNA5SP168-201ENST00000516642 112 ntBASIC1.4□□□□□ -2.19
CDH3P22223 AC136628.3-201ENST00000521868 290 ntBASIC1.4□□□□□ -2.19
CDH3P22223 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.4□□□□□ -2.19
CDH3P22223 AC008737.2-201ENST00000599446 118 ntBASIC1.4□□□□□ -2.19
CDH3P22223 AL360085.1-201ENST00000604713 532 ntBASIC1.4□□□□□ -2.19
CDH3P22223 AC007742.2-201ENST00000618226 398 ntBASIC1.4□□□□□ -2.19
CDH3P22223 U8.7-201ENST00000364940 136 ntBASIC1.39□□□□□ -2.19
CDH3P22223 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
CDH3P22223 MIR660-201ENST00000385235 97 ntBASIC1.39□□□□□ -2.19
CDH3P22223 SNORA26.5-201ENST00000391215 123 ntBASIC1.39□□□□□ -2.19
CDH3P22223 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.39□□□□□ -2.19
CDH3P22223 Y_RNA.621-201ENST00000411065 96 ntBASIC1.39□□□□□ -2.19
CDH3P22223 AC117454.1-201ENST00000491120 168 ntBASIC1.39□□□□□ -2.19
CDH3P22223 RNU7-115P-201ENST00000516433 55 ntBASIC1.39□□□□□ -2.19
CDH3P22223 RNU6-635P-201ENST00000516651 102 ntBASIC1.39□□□□□ -2.19
CDH3P22223 RNU2-31P-201ENST00000516954 155 ntBASIC1.39□□□□□ -2.19
CDH3P22223 SUMO2P16-201ENST00000519475 264 ntBASIC1.39□□□□□ -2.19
CDH3P22223 AC024405.2-202ENST00000532731 184 ntBASIC1.39□□□□□ -2.19
CDH3P22223 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
CDH3P22223 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
CDH3P22223 AP003357.1-201ENST00000604497 148 ntBASIC1.39□□□□□ -2.19
CDH3P22223 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.39□□□□□ -2.19
CDH3P22223 AL591926.4-201ENST00000616895 298 ntBASIC1.39□□□□□ -2.19
CDH3P22223 AL121890.5-201ENST00000620848 304 ntBASIC1.39□□□□□ -2.19
CDH3P22223 AC099654.10-201ENST00000640395 161 ntBASIC1.39□□□□□ -2.19
CDH3P22223 Y_RNA.253-201ENST00000364562 112 ntBASIC1.38□□□□□ -2.19
CDH3P22223 RNU6-326P-201ENST00000365480 107 ntBASIC1.38□□□□□ -2.19
CDH3P22223 SNORA72.4-201ENST00000384174 132 ntBASIC1.38□□□□□ -2.19
CDH3P22223 RNU6-1248P-201ENST00000391096 64 ntBASIC1.38□□□□□ -2.19
CDH3P22223 RNU6-1203P-201ENST00000410703 110 ntBASIC1.38□□□□□ -2.19
CDH3P22223 RNU7-141P-201ENST00000459304 62 ntBASIC1.38□□□□□ -2.19
CDH3P22223 RNU6-570P-201ENST00000517051 105 ntBASIC1.38□□□□□ -2.19
CDH3P22223 AL117187.1-201ENST00000555482 181 ntBASIC1.38□□□□□ -2.19
CDH3P22223 AC127455.1-201ENST00000565496 145 ntBASIC1.38□□□□□ -2.19
CDH3P22223 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.38□□□□□ -2.19
CDH3P22223 POLR3GP1-201ENST00000594073 261 ntBASIC1.38□□□□□ -2.19
CDH3P22223 MIR548AY-201ENST00000617669 107 ntBASIC1.38□□□□□ -2.19
CDH3P22223 SNORD3E-202ENST00000627253 216 ntBASIC1.38□□□□□ -2.19
CDH3P22223 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDH3P22223 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
CDH3P22223 SNORA7.1-201ENST00000363750 139 ntBASIC1.37□□□□□ -2.19
CDH3P22223 RNU6-1338P-201ENST00000516328 91 ntBASIC1.37□□□□□ -2.19
CDH3P22223 RNU7-116P-201ENST00000516940 62 ntBASIC1.37□□□□□ -2.19
CDH3P22223 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
CDH3P22223 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
CDH3P22223 MIR4778-201ENST00000577635 80 ntBASIC1.37□□□□□ -2.19
CDH3P22223 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
CDH3P22223 AC136443.5-201ENST00000603741 370 ntBASIC1.37□□□□□ -2.19
CDH3P22223 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH3P22223 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CDH3P22223 U8.1-201ENST00000362843 134 ntBASIC1.36□□□□□ -2.19
CDH3P22223 RNA5SP259-201ENST00000365541 109 ntBASIC1.36□□□□□ -2.19
CDH3P22223 Y_RNA.376-201ENST00000365638 108 ntBASIC1.36□□□□□ -2.19
CDH3P22223 SNORA53-201ENST00000391141 249 ntBASIC1.36□□□□□ -2.19
CDH3P22223 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
CDH3P22223 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH3P22223 AC091959.1-201ENST00000495857 238 ntBASIC1.36□□□□□ -2.19
CDH3P22223 RNU6-1053P-201ENST00000515930 101 ntBASIC1.36□□□□□ -2.19
CDH3P22223 MIR4762-201ENST00000585261 75 ntBASIC1.36□□□□□ -2.19
CDH3P22223 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
CDH3P22223 AP001282.2-201ENST00000616149 309 ntBASIC1.36□□□□□ -2.19
CDH3P22223 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CDH3P22223 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CDH3P22223 AC134026.1-201ENST00000623249 2239 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AC068700.1-201ENST00000565862 3754 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AL391987.6-201ENST00000305671 199 ntBASIC1.35□□□□□ -2.19
CDH3P22223 SNORA25.1-201ENST00000362326 128 ntBASIC1.35□□□□□ -2.19
CDH3P22223 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
CDH3P22223 SNORD68-201ENST00000363214 84 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RNU6-238P-201ENST00000363313 106 ntBASIC1.35□□□□□ -2.19
CDH3P22223 U8.5-201ENST00000364528 136 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RNU6-713P-201ENST00000384761 107 ntBASIC1.35□□□□□ -2.19
CDH3P22223 Y_RNA.574-201ENST00000384766 95 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RNU6-763P-201ENST00000390865 106 ntBASIC1.35□□□□□ -2.19
CDH3P22223 MTND2P23-201ENST00000422990 651 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AL358176.2-201ENST00000425769 204 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RPL23AP54-201ENST00000495129 419 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AC079140.2-201ENST00000506193 142 ntBASIC1.35□□□□□ -2.19
CDH3P22223 SERF1AP1-201ENST00000514575 187 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RNU6-327P-201ENST00000516270 127 ntBASIC1.35□□□□□ -2.19
CDH3P22223 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CDH3P22223 DEFB108E-201ENST00000524692 240 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AC005357.1-201ENST00000588399 301 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AL157834.3-201ENST00000615543 103 ntBASIC1.35□□□□□ -2.19
CDH3P22223 AL078604.3-201ENST00000615580 211 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms