Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CDH1P12830 MIR411-201ENST00000362239 96 ntBASIC1.66□□□□□ -2.14
CDH1P12830 SNORA1B-201ENST00000362535 133 ntBASIC1.66□□□□□ -2.14
CDH1P12830 Y_RNA.83-201ENST00000363005 113 ntBASIC1.66□□□□□ -2.14
CDH1P12830 RNU6-674P-201ENST00000363831 107 ntBASIC1.66□□□□□ -2.14
CDH1P12830 Y_RNA.262-201ENST00000364641 102 ntBASIC1.66□□□□□ -2.14
CDH1P12830 RNU6-1080P-201ENST00000383982 107 ntBASIC1.66□□□□□ -2.14
CDH1P12830 MIR520A-201ENST00000384862 85 ntBASIC1.66□□□□□ -2.14
CDH1P12830 AC069257.2-201ENST00000441819 155 ntBASIC1.66□□□□□ -2.14
CDH1P12830 AC233266.1-201ENST00000454518 96 ntBASIC1.66□□□□□ -2.14
CDH1P12830 RNU6-437P-201ENST00000459408 95 ntBASIC1.66□□□□□ -2.14
CDH1P12830 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
CDH1P12830 AL358944.1-201ENST00000528537 144 ntBASIC1.66□□□□□ -2.14
CDH1P12830 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH1P12830 AC242852.1-201ENST00000612151 96 ntBASIC1.66□□□□□ -2.14
CDH1P12830 AC244015.1-201ENST00000622301 99 ntBASIC1.66□□□□□ -2.14
CDH1P12830 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.66□□□□□ -2.14
CDH1P12830 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CDH1P12830 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CDH1P12830 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CDH1P12830 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CDH1P12830 Y_RNA.572-201ENST00000384757 98 ntBASIC1.65□□□□□ -2.15
CDH1P12830 MIR562-201ENST00000384894 95 ntBASIC1.65□□□□□ -2.15
CDH1P12830 MIR626-201ENST00000385032 94 ntBASIC1.65□□□□□ -2.15
CDH1P12830 MIR526A2-201ENST00000390198 65 ntBASIC1.65□□□□□ -2.15
CDH1P12830 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CDH1P12830 RNU6-383P-201ENST00000410864 94 ntBASIC1.65□□□□□ -2.15
CDH1P12830 SNORA31.10-201ENST00000516482 106 ntBASIC1.65□□□□□ -2.15
CDH1P12830 Y_RNA.802-201ENST00000614892 130 ntBASIC1.65□□□□□ -2.15
CDH1P12830 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.65□□□□□ -2.15
CDH1P12830 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CDH1P12830 Y_RNA.203-201ENST00000364106 102 ntBASIC1.64□□□□□ -2.15
CDH1P12830 Y_RNA.297-201ENST00000364950 91 ntBASIC1.64□□□□□ -2.15
CDH1P12830 Y_RNA.308-201ENST00000365043 101 ntBASIC1.64□□□□□ -2.15
CDH1P12830 SNORA4.2-201ENST00000365313 147 ntBASIC1.64□□□□□ -2.15
CDH1P12830 SNORA8.3-201ENST00000384679 139 ntBASIC1.64□□□□□ -2.15
CDH1P12830 RNU6-907P-201ENST00000390924 102 ntBASIC1.64□□□□□ -2.15
CDH1P12830 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH1P12830 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
CDH1P12830 SNORA31.17-201ENST00000516953 127 ntBASIC1.64□□□□□ -2.15
CDH1P12830 RNU6-250P-201ENST00000516958 103 ntBASIC1.64□□□□□ -2.15
CDH1P12830 AP002004.2-201ENST00000531656 154 ntBASIC1.64□□□□□ -2.15
CDH1P12830 MIR5688-201ENST00000580619 83 ntBASIC1.64□□□□□ -2.15
CDH1P12830 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.64□□□□□ -2.15
CDH1P12830 MIR8054-201ENST00000620877 86 ntBASIC1.64□□□□□ -2.15
CDH1P12830 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CDH1P12830 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDH1P12830 Y_RNA.24-201ENST00000362508 103 ntBASIC1.63□□□□□ -2.15
CDH1P12830 Y_RNA.796-201ENST00000364268 102 ntBASIC1.63□□□□□ -2.15
CDH1P12830 snoU2_19.4-201ENST00000364329 80 ntBASIC1.63□□□□□ -2.15
CDH1P12830 Y_RNA.799-201ENST00000364992 102 ntBASIC1.63□□□□□ -2.15
CDH1P12830 SNORA12.1-201ENST00000390873 148 ntBASIC1.63□□□□□ -2.15
CDH1P12830 RNU6-440P-201ENST00000390882 105 ntBASIC1.63□□□□□ -2.15
CDH1P12830 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
CDH1P12830 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
CDH1P12830 MIR1278-201ENST00000408753 81 ntBASIC1.63□□□□□ -2.15
CDH1P12830 AC009310.1-201ENST00000414414 451 ntBASIC1.63□□□□□ -2.15
CDH1P12830 CYCSP49-201ENST00000420810 319 ntBASIC1.63□□□□□ -2.15
CDH1P12830 HSPE1P9-201ENST00000440046 311 ntBASIC1.63□□□□□ -2.15
CDH1P12830 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.63□□□□□ -2.15
CDH1P12830 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDH1P12830 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.63□□□□□ -2.15
CDH1P12830 CBX3P4-201ENST00000538909 354 ntBASIC1.63□□□□□ -2.15
CDH1P12830 MIR4724-201ENST00000579485 89 ntBASIC1.63□□□□□ -2.15
CDH1P12830 MIR4308-201ENST00000580634 81 ntBASIC1.63□□□□□ -2.15
CDH1P12830 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CDH1P12830 MIR367-201ENST00000362299 68 ntBASIC1.62□□□□□ -2.15
CDH1P12830 Y_RNA.253-201ENST00000364562 112 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU6-923P-201ENST00000364753 107 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU4-17P-201ENST00000365598 141 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU6-47P-201ENST00000383866 107 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU6-969P-201ENST00000383900 105 ntBASIC1.62□□□□□ -2.15
CDH1P12830 Y_RNA.785-201ENST00000384290 109 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU6-381P-201ENST00000391259 108 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU6-493P-201ENST00000391321 108 ntBASIC1.62□□□□□ -2.15
CDH1P12830 Y_RNA.621-201ENST00000411065 96 ntBASIC1.62□□□□□ -2.15
CDH1P12830 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH1P12830 Z98949.2-201ENST00000440996 144 ntBASIC1.62□□□□□ -2.15
CDH1P12830 AL049830.1-201ENST00000468034 425 ntBASIC1.62□□□□□ -2.15
CDH1P12830 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH1P12830 Y_RNA.700-201ENST00000516806 100 ntBASIC1.62□□□□□ -2.15
CDH1P12830 RNU2-56P-201ENST00000516826 190 ntBASIC1.62□□□□□ -2.15
CDH1P12830 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH1P12830 MIR4299-201ENST00000577899 72 ntBASIC1.62□□□□□ -2.15
CDH1P12830 MIR3668-201ENST00000582138 75 ntBASIC1.62□□□□□ -2.15
CDH1P12830 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.62□□□□□ -2.15
CDH1P12830 Z83818.1-201ENST00000603584 150 ntBASIC1.62□□□□□ -2.15
CDH1P12830 AL591926.4-201ENST00000616895 298 ntBASIC1.62□□□□□ -2.15
CDH1P12830 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CDH1P12830 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDH1P12830 RNU4-41P-201ENST00000364426 143 ntBASIC1.61□□□□□ -2.15
CDH1P12830 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
CDH1P12830 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
CDH1P12830 RNU6-918P-201ENST00000391219 106 ntBASIC1.61□□□□□ -2.15
CDH1P12830 RNA5SP212-201ENST00000391223 107 ntBASIC1.61□□□□□ -2.15
CDH1P12830 RNU2-7P-201ENST00000410794 178 ntBASIC1.61□□□□□ -2.15
CDH1P12830 RN7SKP101-201ENST00000411376 320 ntBASIC1.61□□□□□ -2.15
CDH1P12830 COX6CP10-201ENST00000416832 224 ntBASIC1.61□□□□□ -2.15
CDH1P12830 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH1P12830 Y_RNA.644-201ENST00000459006 113 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms