Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 Y_RNA.220-201ENST00000364244 109 ntBASIC3.08□□□□□ -1.92
BMP3P12645 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
BMP3P12645 RNU6-1186P-201ENST00000410429 97 ntBASIC3.08□□□□□ -1.92
BMP3P12645 RPS3AP1-201ENST00000413190 320 ntBASIC3.08□□□□□ -1.92
BMP3P12645 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.08□□□□□ -1.92
BMP3P12645 AC093259.1-201ENST00000509755 300 ntBASIC3.08□□□□□ -1.92
BMP3P12645 SNORA4.4-201ENST00000515921 135 ntBASIC3.08□□□□□ -1.92
BMP3P12645 RNU7-99P-201ENST00000516271 62 ntBASIC3.08□□□□□ -1.92
BMP3P12645 RN7SKP12-201ENST00000516275 143 ntBASIC3.08□□□□□ -1.92
BMP3P12645 RNU6-1291P-201ENST00000516591 104 ntBASIC3.08□□□□□ -1.92
BMP3P12645 MIR6817-201ENST00000615588 66 ntBASIC3.08□□□□□ -1.92
BMP3P12645 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BMP3P12645 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BMP3P12645 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BMP3P12645 RNU6-349P-201ENST00000362402 107 ntBASIC3.07□□□□□ -1.92
BMP3P12645 RNU4-82P-201ENST00000362443 140 ntBASIC3.07□□□□□ -1.92
BMP3P12645 Y_RNA.213-201ENST00000364178 111 ntBASIC3.07□□□□□ -1.92
BMP3P12645 Y_RNA.332-201ENST00000365271 113 ntBASIC3.07□□□□□ -1.92
BMP3P12645 AC123900.1-201ENST00000420390 96 ntBASIC3.07□□□□□ -1.92
BMP3P12645 HMGN2P34-201ENST00000437647 269 ntBASIC3.07□□□□□ -1.92
BMP3P12645 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.07□□□□□ -1.92
BMP3P12645 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.07□□□□□ -1.92
BMP3P12645 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BMP3P12645 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BMP3P12645 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
BMP3P12645 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BMP3P12645 AC018630.2-201ENST00000534866 2403 ntBASIC3.07□□□□□ -1.92
BMP3P12645 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BMP3P12645 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
BMP3P12645 Y_RNA.344-201ENST00000365381 112 ntBASIC3.06□□□□□ -1.92
BMP3P12645 RNU6-546P-201ENST00000383991 107 ntBASIC3.06□□□□□ -1.92
BMP3P12645 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.06□□□□□ -1.92
BMP3P12645 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.06□□□□□ -1.92
BMP3P12645 RNU6-904P-201ENST00000516206 101 ntBASIC3.06□□□□□ -1.92
BMP3P12645 RNA5SP282-201ENST00000516355 108 ntBASIC3.06□□□□□ -1.92
BMP3P12645 MIR4635-201ENST00000583759 79 ntBASIC3.06□□□□□ -1.92
BMP3P12645 AC087685.1-201ENST00000587507 141 ntBASIC3.06□□□□□ -1.92
BMP3P12645 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
BMP3P12645 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BMP3P12645 ZNF271P-202ENST00000465539 1970 ntBASIC3.05□□□□□ -1.92
BMP3P12645 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
BMP3P12645 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
BMP3P12645 MIR126-201ENST00000362291 85 ntBASIC3.05□□□□□ -1.92
BMP3P12645 RNU6-743P-201ENST00000364151 106 ntBASIC3.05□□□□□ -1.92
BMP3P12645 Y_RNA.242-201ENST00000364473 110 ntBASIC3.05□□□□□ -1.92
BMP3P12645 RNU6-690P-201ENST00000365242 106 ntBASIC3.05□□□□□ -1.92
BMP3P12645 RNU6-820P-201ENST00000384273 107 ntBASIC3.05□□□□□ -1.92
BMP3P12645 RNU6-1328P-201ENST00000410938 106 ntBASIC3.05□□□□□ -1.92
BMP3P12645 RNU6-592P-201ENST00000411333 103 ntBASIC3.05□□□□□ -1.92
BMP3P12645 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.05□□□□□ -1.92
BMP3P12645 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.05□□□□□ -1.92
BMP3P12645 RNA5SP148-201ENST00000516527 94 ntBASIC3.05□□□□□ -1.92
BMP3P12645 SCARNA11.3-201ENST00000517276 130 ntBASIC3.05□□□□□ -1.92
BMP3P12645 AC004486.1-201ENST00000546846 233 ntBASIC3.05□□□□□ -1.92
BMP3P12645 AC084364.2-201ENST00000546924 395 ntBASIC3.05□□□□□ -1.92
BMP3P12645 MIR4435-1-201ENST00000582552 80 ntBASIC3.05□□□□□ -1.92
BMP3P12645 MIR6715A-201ENST00000615929 79 ntBASIC3.05□□□□□ -1.92
BMP3P12645 MALAT1.1-201ENST00000618249 95 ntBASIC3.05□□□□□ -1.92
BMP3P12645 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BMP3P12645 Y_RNA.298-201ENST00000364960 107 ntBASIC3.04□□□□□ -1.92
BMP3P12645 SNORA2.2-201ENST00000365473 135 ntBASIC3.04□□□□□ -1.92
BMP3P12645 Y_RNA.410-201ENST00000383992 113 ntBASIC3.04□□□□□ -1.92
BMP3P12645 MIR759-201ENST00000390224 91 ntBASIC3.04□□□□□ -1.92
BMP3P12645 FTH1P12-201ENST00000432137 551 ntBASIC3.04□□□□□ -1.92
BMP3P12645 RPS15AP28-201ENST00000435088 386 ntBASIC3.04□□□□□ -1.92
BMP3P12645 RNU6-341P-201ENST00000516973 96 ntBASIC3.04□□□□□ -1.92
BMP3P12645 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.04□□□□□ -1.92
BMP3P12645 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.04□□□□□ -1.92
BMP3P12645 AC007229.1-201ENST00000590455 412 ntBASIC3.04□□□□□ -1.92
BMP3P12645 SNORD115-40-201ENST00000606510 82 ntBASIC3.04□□□□□ -1.92
BMP3P12645 AC134878.1-201ENST00000619901 243 ntBASIC3.04□□□□□ -1.92
BMP3P12645 MIR6079-201ENST00000635807 62 ntBASIC3.04□□□□□ -1.92
BMP3P12645 MIR2052-201ENST00000636055 55 ntBASIC3.04□□□□□ -1.92
BMP3P12645 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.04□□□□□ -1.92
BMP3P12645 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BMP3P12645 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
BMP3P12645 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
BMP3P12645 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
BMP3P12645 snoU2-30.2-201ENST00000362805 70 ntBASIC3.03□□□□□ -1.92
BMP3P12645 RNU6-1152P-201ENST00000384576 107 ntBASIC3.03□□□□□ -1.92
BMP3P12645 RNU6-1104P-201ENST00000384723 104 ntBASIC3.03□□□□□ -1.92
BMP3P12645 MIR450A2-201ENST00000385022 100 ntBASIC3.03□□□□□ -1.92
BMP3P12645 MIR522-201ENST00000385071 87 ntBASIC3.03□□□□□ -1.92
BMP3P12645 MICF-203ENST00000432679 129 ntBASIC3.03□□□□□ -1.92
BMP3P12645 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.03□□□□□ -1.92
BMP3P12645 RNU6-1146P-201ENST00000516282 102 ntBASIC3.03□□□□□ -1.92
BMP3P12645 Y_RNA.685-201ENST00000516532 108 ntBASIC3.03□□□□□ -1.92
BMP3P12645 SUMO2P16-201ENST00000519475 264 ntBASIC3.03□□□□□ -1.92
BMP3P12645 AL358944.1-201ENST00000528537 144 ntBASIC3.03□□□□□ -1.92
BMP3P12645 AC141557.1-201ENST00000540982 400 ntBASIC3.03□□□□□ -1.92
BMP3P12645 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.03□□□□□ -1.92
BMP3P12645 AC022217.4-201ENST00000604389 163 ntBASIC3.03□□□□□ -1.92
BMP3P12645 AC021443.1-201ENST00000604478 211 ntBASIC3.03□□□□□ -1.92
BMP3P12645 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.03□□□□□ -1.92
BMP3P12645 UCA1.1-201ENST00000620952 75 ntBASIC3.03□□□□□ -1.92
BMP3P12645 U6.108-201ENST00000637764 58 ntBASIC3.03□□□□□ -1.92
BMP3P12645 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
BMP3P12645 ZNF720P1-201ENST00000562403 1939 ntBASIC3.03□□□□□ -1.92
BMP3P12645 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BMP3P12645 MIR302B-201ENST00000362188 73 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms