Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC141273.2-201ENST00000618989 130 ntBASIC1.96□□□□□ -2.1
PF4V1P10720 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.96□□□□□ -2.1
PF4V1P10720 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PF4V1P10720 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PF4V1P10720 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
PF4V1P10720 Y_RNA.336-201ENST00000365307 109 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 Y_RNA.552-201ENST00000384665 112 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 Y_RNA.626-201ENST00000411288 95 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.95□□□□□ -2.1
PF4V1P10720 HSPE1P24-201ENST00000450782 238 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 RNU6-1116P-201ENST00000517269 99 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 SUMO2P16-201ENST00000519475 264 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 MIR4778-201ENST00000577635 80 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.95□□□□□ -2.1
PF4V1P10720 AC009779.6-201ENST00000603972 165 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 uc_338.4-201ENST00000616635 176 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 MIR8063-201ENST00000621930 81 ntBASIC1.95□□□□□ -2.1
PF4V1P10720 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PF4V1P10720 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PF4V1P10720 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PF4V1P10720 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
PF4V1P10720 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PF4V1P10720 MIR302D-201ENST00000362275 68 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 RNU6-199P-201ENST00000362954 107 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 SNORD14E-201ENST00000364009 85 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 Y_RNA.229-201ENST00000364347 113 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 SNORD50B-201ENST00000364995 70 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 RNA5SP259-201ENST00000365541 109 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 DEFA7P-201ENST00000382676 285 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 Y_RNA.515-201ENST00000384535 112 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 MIR802-201ENST00000390235 94 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 RNU4-53P-201ENST00000410828 140 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.94□□□□□ -2.1
PF4V1P10720 AC008507.4-201ENST00000585464 127 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.94□□□□□ -2.1
PF4V1P10720 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.94□□□□□ -2.1
PF4V1P10720 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PF4V1P10720 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
PF4V1P10720 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PF4V1P10720 MIR6073-201ENST00000352083 89 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 Y_RNA.200-201ENST00000364018 102 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 MIR616-201ENST00000385293 97 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 MIR1298-201ENST00000408783 112 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 AC234781.5-201ENST00000508429 271 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 RN7SKP164-201ENST00000516138 266 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 RNU6-126P-201ENST00000516685 103 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 MIR4422-201ENST00000581938 83 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 AL391903.3-201ENST00000612158 163 ntBASIC1.93□□□□□ -2.1
PF4V1P10720 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PF4V1P10720 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PF4V1P10720 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PF4V1P10720 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
PF4V1P10720 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PF4V1P10720 Y_RNA.199-201ENST00000364014 102 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 SNORD114-30-201ENST00000364448 72 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 RNU6-442P-201ENST00000383968 104 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 RNY3P5-201ENST00000384127 102 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 MIR452-201ENST00000385020 85 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 RNU6-381P-201ENST00000391259 108 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 RNA5SP181-201ENST00000410246 98 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 RN7SKP51-201ENST00000410781 304 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.92□□□□□ -2.1
PF4V1P10720 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.92□□□□□ -2.1
PF4V1P10720 AC079804.2-201ENST00000490376 200 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.92□□□□□ -2.1
PF4V1P10720 AL049861.1-201ENST00000603130 150 ntBASIC1.92□□□□□ -2.1
PF4V1P10720 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 RNA5SP456-201ENST00000364002 114 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 RNU6-1138P-201ENST00000365359 106 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 Y_RNA.572-201ENST00000384757 98 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.91□□□□□ -2.1
PF4V1P10720 AC093850.1-201ENST00000454121 251 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 UBL5P3-201ENST00000475112 231 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 AC079140.2-201ENST00000506193 142 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.91□□□□□ -2.1
PF4V1P10720 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.91□□□□□ -2.1
PF4V1P10720 MIR4662B-201ENST00000579498 81 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 MIR6873-201ENST00000622788 63 ntBASIC1.91□□□□□ -2.1
PF4V1P10720 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
PF4V1P10720 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PF4V1P10720 Y_RNA.83-201ENST00000363005 113 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RNU6-103P-201ENST00000363686 107 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 snoU2_19.4-201ENST00000364329 80 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 Y_RNA.308-201ENST00000365043 101 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PF4V1P10720 RNU1-78P-201ENST00000391248 165 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RNU6-847P-201ENST00000411115 108 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RPS12P2-201ENST00000439728 269 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.9□□□□□ -2.11
PF4V1P10720 SNORD77.4-201ENST00000516158 81 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RNU7-149P-201ENST00000516739 59 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RNU6-388P-201ENST00000517012 105 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 RNU6-389P-201ENST00000517048 105 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.9□□□□□ -2.11
PF4V1P10720 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms