Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNA5SP467-201ENST00000391274 118 ntBASIC2.19□□□□□ -2.06
RHOP08100 SNORD23.1-201ENST00000408212 104 ntBASIC2.19□□□□□ -2.06
RHOP08100 AL603825.1-201ENST00000438481 80 ntBASIC2.19□□□□□ -2.06
RHOP08100 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.19□□□□□ -2.06
RHOP08100 RNU1-142P-201ENST00000516682 145 ntBASIC2.19□□□□□ -2.06
RHOP08100 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
RHOP08100 AL358944.1-201ENST00000528537 144 ntBASIC2.19□□□□□ -2.06
RHOP08100 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.19□□□□□ -2.06
RHOP08100 AC078899.2-201ENST00000595282 212 ntBASIC2.19□□□□□ -2.06
RHOP08100 AC022513.1-201ENST00000624512 117 ntBASIC2.19□□□□□ -2.06
RHOP08100 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RHOP08100 Y_RNA.8-201ENST00000362353 102 ntBASIC2.18□□□□□ -2.06
RHOP08100 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
RHOP08100 SNORA33-201ENST00000363664 130 ntBASIC2.18□□□□□ -2.06
RHOP08100 RNU6-728P-201ENST00000365375 104 ntBASIC2.18□□□□□ -2.06
RHOP08100 RNU6-643P-201ENST00000384018 107 ntBASIC2.18□□□□□ -2.06
RHOP08100 MIR562-201ENST00000384894 95 ntBASIC2.18□□□□□ -2.06
RHOP08100 MIR15B-201ENST00000385045 98 ntBASIC2.18□□□□□ -2.06
RHOP08100 SNORD11-201ENST00000459124 84 ntBASIC2.18□□□□□ -2.06
RHOP08100 RNU6-341P-201ENST00000516973 96 ntBASIC2.18□□□□□ -2.06
RHOP08100 AC005786.1-201ENST00000588553 154 ntBASIC2.18□□□□□ -2.06
RHOP08100 MIR6079-201ENST00000635807 62 ntBASIC2.18□□□□□ -2.06
RHOP08100 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RHOP08100 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RHOP08100 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
RHOP08100 RNU2-55P-201ENST00000411146 174 ntBASIC2.17□□□□□ -2.06
RHOP08100 AL121914.1-201ENST00000450188 156 ntBASIC2.17□□□□□ -2.06
RHOP08100 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
RHOP08100 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
RHOP08100 AL160236.1-201ENST00000556317 195 ntBASIC2.17□□□□□ -2.06
RHOP08100 MIR3910-1-201ENST00000580936 111 ntBASIC2.17□□□□□ -2.06
RHOP08100 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
RHOP08100 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.16□□□□□ -2.06
RHOP08100 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RHOP08100 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RHOP08100 Y_RNA.796-201ENST00000364268 102 ntBASIC2.16□□□□□ -2.06
RHOP08100 Y_RNA.799-201ENST00000364992 102 ntBASIC2.16□□□□□ -2.06
RHOP08100 Y_RNA.400-201ENST00000383963 111 ntBASIC2.16□□□□□ -2.06
RHOP08100 MIR613-201ENST00000385248 95 ntBASIC2.16□□□□□ -2.06
RHOP08100 SNORA26.9-201ENST00000391322 122 ntBASIC2.16□□□□□ -2.06
RHOP08100 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
RHOP08100 RNU6-561P-201ENST00000516222 102 ntBASIC2.16□□□□□ -2.06
RHOP08100 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
RHOP08100 AL031274.2-201ENST00000599419 203 ntBASIC2.16□□□□□ -2.06
RHOP08100 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
RHOP08100 RNU6-862P-201ENST00000362804 105 ntBASIC2.15□□□□□ -2.07
RHOP08100 SNORD45.3-201ENST00000363836 72 ntBASIC2.15□□□□□ -2.07
RHOP08100 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
RHOP08100 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
RHOP08100 TMSB4XP3-201ENST00000445144 114 ntBASIC2.15□□□□□ -2.07
RHOP08100 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.15□□□□□ -2.07
RHOP08100 SNORD77.4-201ENST00000516158 81 ntBASIC2.15□□□□□ -2.07
RHOP08100 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.15□□□□□ -2.07
RHOP08100 MIR4529-201ENST00000578110 78 ntBASIC2.15□□□□□ -2.07
RHOP08100 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.15□□□□□ -2.07
RHOP08100 Y_RNA.778-201ENST00000620203 90 ntBASIC2.15□□□□□ -2.07
RHOP08100 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RHOP08100 RNU6-1209P-201ENST00000363655 107 ntBASIC2.14□□□□□ -2.07
RHOP08100 Y_RNA.337-201ENST00000365312 102 ntBASIC2.14□□□□□ -2.07
RHOP08100 RNU6-484P-201ENST00000384016 107 ntBASIC2.14□□□□□ -2.07
RHOP08100 RNA5SP323-201ENST00000391094 133 ntBASIC2.14□□□□□ -2.07
RHOP08100 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.14□□□□□ -2.07
RHOP08100 RNU6-346P-201ENST00000516288 111 ntBASIC2.14□□□□□ -2.07
RHOP08100 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
RHOP08100 RPL23AP91-201ENST00000569211 455 ntBASIC2.14□□□□□ -2.07
RHOP08100 DNAJC19P2-201ENST00000593340 302 ntBASIC2.14□□□□□ -2.07
RHOP08100 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
RHOP08100 uc_338.4-201ENST00000616635 176 ntBASIC2.14□□□□□ -2.07
RHOP08100 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
RHOP08100 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RHOP08100 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RHOP08100 RNU6-704P-201ENST00000364162 103 ntBASIC2.13□□□□□ -2.07
RHOP08100 Y_RNA.253-201ENST00000364562 112 ntBASIC2.13□□□□□ -2.07
RHOP08100 MIR583-201ENST00000384846 75 ntBASIC2.13□□□□□ -2.07
RHOP08100 Y_RNA.587-201ENST00000391210 103 ntBASIC2.13□□□□□ -2.07
RHOP08100 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
RHOP08100 MIR1283-2-201ENST00000408621 87 ntBASIC2.13□□□□□ -2.07
RHOP08100 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
RHOP08100 AL163195.1-201ENST00000496941 348 ntBASIC2.13□□□□□ -2.07
RHOP08100 RNU6-1291P-201ENST00000516591 104 ntBASIC2.13□□□□□ -2.07
RHOP08100 SNORA31.25-201ENST00000517242 134 ntBASIC2.13□□□□□ -2.07
RHOP08100 AP002004.2-201ENST00000531656 154 ntBASIC2.13□□□□□ -2.07
RHOP08100 AC097639.2-201ENST00000603159 172 ntBASIC2.13□□□□□ -2.07
RHOP08100 JPX_2.1-201ENST00000614161 69 ntBASIC2.13□□□□□ -2.07
RHOP08100 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.13□□□□□ -2.07
RHOP08100 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.13□□□□□ -2.07
RHOP08100 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RHOP08100 AC005336.3-201ENST00000623833 2679 ntBASIC2.13□□□□□ -2.07
RHOP08100 SNORD115-3-201ENST00000363100 82 ntBASIC2.12□□□□□ -2.07
RHOP08100 SNORD113-1-201ENST00000365321 69 ntBASIC2.12□□□□□ -2.07
RHOP08100 RNU6-1138P-201ENST00000365359 106 ntBASIC2.12□□□□□ -2.07
RHOP08100 RNA5SP465-201ENST00000391195 109 ntBASIC2.12□□□□□ -2.07
RHOP08100 AC006461.1-201ENST00000412637 326 ntBASIC2.12□□□□□ -2.07
RHOP08100 CYCSP49-201ENST00000420810 319 ntBASIC2.12□□□□□ -2.07
RHOP08100 SNRPGP8-201ENST00000454064 226 ntBASIC2.12□□□□□ -2.07
RHOP08100 AC023449.1-201ENST00000454464 154 ntBASIC2.12□□□□□ -2.07
RHOP08100 HMGN1P7-201ENST00000491722 313 ntBASIC2.12□□□□□ -2.07
RHOP08100 RNA5SP458-201ENST00000516188 119 ntBASIC2.12□□□□□ -2.07
RHOP08100 RNA5SP153-201ENST00000516498 76 ntBASIC2.12□□□□□ -2.07
RHOP08100 SNORD116-25-201ENST00000516517 92 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms