Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 U3.45-201ENST00000607547 219 ntBASIC3.2□□□□□ -1.9
THBS1P07996 MIR1255B1-201ENST00000636325 63 ntBASIC3.2□□□□□ -1.9
THBS1P07996 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
THBS1P07996 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
THBS1P07996 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
THBS1P07996 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
THBS1P07996 MIR30E-201ENST00000362104 92 ntBASIC3.19□□□□□ -1.9
THBS1P07996 Y_RNA.73-201ENST00000362910 113 ntBASIC3.19□□□□□ -1.9
THBS1P07996 Y_RNA.95-201ENST00000363079 95 ntBASIC3.19□□□□□ -1.9
THBS1P07996 Y_RNA.99-201ENST00000363138 105 ntBASIC3.19□□□□□ -1.9
THBS1P07996 RNU6-525P-201ENST00000363685 104 ntBASIC3.19□□□□□ -1.9
THBS1P07996 RNU6-424P-201ENST00000384367 105 ntBASIC3.19□□□□□ -1.9
THBS1P07996 RNU6-24P-201ENST00000384440 107 ntBASIC3.19□□□□□ -1.9
THBS1P07996 SNORD77B-201ENST00000391112 67 ntBASIC3.19□□□□□ -1.9
THBS1P07996 SRIP3-201ENST00000413200 219 ntBASIC3.19□□□□□ -1.9
THBS1P07996 RPS29P4-201ENST00000414733 161 ntBASIC3.19□□□□□ -1.9
THBS1P07996 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
THBS1P07996 AC073261.1-201ENST00000429409 121 ntBASIC3.19□□□□□ -1.9
THBS1P07996 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.19□□□□□ -1.9
THBS1P07996 RNU6-998P-201ENST00000515894 101 ntBASIC3.19□□□□□ -1.9
THBS1P07996 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
THBS1P07996 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
THBS1P07996 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.19□□□□□ -1.9
THBS1P07996 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
THBS1P07996 AC021613.1-201ENST00000623880 111 ntBASIC3.19□□□□□ -1.9
THBS1P07996 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
THBS1P07996 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
THBS1P07996 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
THBS1P07996 MIR342-201ENST00000362212 99 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-34-201ENST00000362441 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-12-201ENST00000362583 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-29-201ENST00000362834 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-9-201ENST00000362912 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-21-201ENST00000362963 81 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-14-201ENST00000363090 81 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-13-201ENST00000363358 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-41-201ENST00000363608 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-11-201ENST00000363616 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-5-201ENST00000363633 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-39-201ENST00000363694 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-4-201ENST00000363810 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-16-201ENST00000363887 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-6-201ENST00000363942 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-42-201ENST00000364273 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 Y_RNA.241-201ENST00000364470 117 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-15-201ENST00000364809 81 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-1-201ENST00000364961 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-26-201ENST00000365067 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-10-201ENST00000365073 81 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-43-201ENST00000365503 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 SNORD115-36-201ENST00000365629 82 ntBASIC3.18□□□□□ -1.9
THBS1P07996 RN7SL297P-201ENST00000483161 293 ntBASIC3.18□□□□□ -1.9
THBS1P07996 RNU6-857P-201ENST00000515893 110 ntBASIC3.18□□□□□ -1.9
THBS1P07996 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.18□□□□□ -1.9
THBS1P07996 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
THBS1P07996 MIR4662A-201ENST00000637499 67 ntBASIC3.18□□□□□ -1.9
THBS1P07996 MIR7515-201ENST00000637837 67 ntBASIC3.18□□□□□ -1.9
THBS1P07996 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
THBS1P07996 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
THBS1P07996 RNU6-402P-201ENST00000410678 103 ntBASIC3.17□□□□□ -1.9
THBS1P07996 RNU2-48P-201ENST00000410694 191 ntBASIC3.17□□□□□ -1.9
THBS1P07996 RPL23AP63-201ENST00000498752 471 ntBASIC3.17□□□□□ -1.9
THBS1P07996 Y_RNA.659-201ENST00000515994 113 ntBASIC3.17□□□□□ -1.9
THBS1P07996 MIR3200-201ENST00000580767 85 ntBASIC3.17□□□□□ -1.9
THBS1P07996 AC002984.1-201ENST00000591692 448 ntBASIC3.17□□□□□ -1.9
THBS1P07996 Y_RNA.773-201ENST00000607168 90 ntBASIC3.17□□□□□ -1.9
THBS1P07996 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.17□□□□□ -1.9
THBS1P07996 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
THBS1P07996 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.17□□□□□ -1.9
THBS1P07996 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.17□□□□□ -1.9
THBS1P07996 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
THBS1P07996 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.16□□□□□ -1.9
THBS1P07996 SNORD116-10-201ENST00000363791 102 ntBASIC3.16□□□□□ -1.9
THBS1P07996 SNORD115-35-201ENST00000365122 82 ntBASIC3.16□□□□□ -1.9
THBS1P07996 MIR483-201ENST00000385070 76 ntBASIC3.16□□□□□ -1.9
THBS1P07996 BTF3P4-201ENST00000418852 495 ntBASIC3.16□□□□□ -1.9
THBS1P07996 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.16□□□□□ -1.9
THBS1P07996 AL512326.2-201ENST00000426359 151 ntBASIC3.16□□□□□ -1.9
THBS1P07996 AL163195.1-201ENST00000496941 348 ntBASIC3.16□□□□□ -1.9
THBS1P07996 SNORA74D-201ENST00000516404 141 ntBASIC3.16□□□□□ -1.9
THBS1P07996 NDUFB9P3-201ENST00000521269 501 ntBASIC3.16□□□□□ -1.9
THBS1P07996 MIR4777-201ENST00000583710 86 ntBASIC3.16□□□□□ -1.9
THBS1P07996 HSPE1P19-201ENST00000603327 295 ntBASIC3.16□□□□□ -1.9
THBS1P07996 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.16□□□□□ -1.9
THBS1P07996 AL355297.2-201ENST00000604792 129 ntBASIC3.16□□□□□ -1.9
THBS1P07996 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.16□□□□□ -1.9
THBS1P07996 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.16□□□□□ -1.9
THBS1P07996 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
THBS1P07996 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
THBS1P07996 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
THBS1P07996 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
THBS1P07996 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
THBS1P07996 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
THBS1P07996 Y_RNA.437-201ENST00000384113 113 ntBASIC3.15□□□□□ -1.91
THBS1P07996 RNU6-160P-201ENST00000384591 107 ntBASIC3.15□□□□□ -1.91
THBS1P07996 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
THBS1P07996 MIR605-201ENST00000385078 83 ntBASIC3.15□□□□□ -1.91
THBS1P07996 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
THBS1P07996 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
THBS1P07996 SNORA48.8-201ENST00000391324 134 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms