Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC091895.1-201ENST00000624494 256 ntBASIC1.44□□□□□ -2.18
VTNP04004 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VTNP04004 Y_RNA.368-201ENST00000365547 113 ntBASIC1.43□□□□□ -2.18
VTNP04004 Y_RNA.456-201ENST00000384232 111 ntBASIC1.43□□□□□ -2.18
VTNP04004 Y_RNA.461-201ENST00000384263 103 ntBASIC1.43□□□□□ -2.18
VTNP04004 RNU6-1031P-201ENST00000384773 107 ntBASIC1.43□□□□□ -2.18
VTNP04004 RNU6-1105P-201ENST00000384774 107 ntBASIC1.43□□□□□ -2.18
VTNP04004 MIR562-201ENST00000384894 95 ntBASIC1.43□□□□□ -2.18
VTNP04004 SNORA40.6-201ENST00000391153 128 ntBASIC1.43□□□□□ -2.18
VTNP04004 AL034345.1-201ENST00000407768 123 ntBASIC1.43□□□□□ -2.18
VTNP04004 MIR1287-201ENST00000408492 90 ntBASIC1.43□□□□□ -2.18
VTNP04004 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
VTNP04004 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.43□□□□□ -2.18
VTNP04004 MLLT10P1-201ENST00000418346 262 ntBASIC1.43□□□□□ -2.18
VTNP04004 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.43□□□□□ -2.18
VTNP04004 JTBP1-201ENST00000441314 247 ntBASIC1.43□□□□□ -2.18
VTNP04004 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.43□□□□□ -2.18
VTNP04004 AP002004.2-201ENST00000531656 154 ntBASIC1.43□□□□□ -2.18
VTNP04004 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.43□□□□□ -2.18
VTNP04004 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
VTNP04004 POLR3GP1-201ENST00000594073 261 ntBASIC1.43□□□□□ -2.18
VTNP04004 U8.7-201ENST00000364940 136 ntBASIC1.42□□□□□ -2.18
VTNP04004 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
VTNP04004 MTCO2P33-201ENST00000402100 465 ntBASIC1.42□□□□□ -2.18
VTNP04004 MIR548F4-201ENST00000408515 105 ntBASIC1.42□□□□□ -2.18
VTNP04004 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.42□□□□□ -2.18
VTNP04004 AL358176.2-201ENST00000425769 204 ntBASIC1.42□□□□□ -2.18
VTNP04004 AL135790.2-201ENST00000437701 267 ntBASIC1.42□□□□□ -2.18
VTNP04004 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
VTNP04004 RNU6-1338P-201ENST00000516328 91 ntBASIC1.42□□□□□ -2.18
VTNP04004 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.42□□□□□ -2.18
VTNP04004 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
VTNP04004 MIR8062-201ENST00000621515 85 ntBASIC1.42□□□□□ -2.18
VTNP04004 MIR8063-201ENST00000621930 81 ntBASIC1.42□□□□□ -2.18
VTNP04004 U6.104-201ENST00000637979 90 ntBASIC1.42□□□□□ -2.18
VTNP04004 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.42□□□□□ -2.18
VTNP04004 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
VTNP04004 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
VTNP04004 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
VTNP04004 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
VTNP04004 SNORD68-201ENST00000363214 84 ntBASIC1.41□□□□□ -2.18
VTNP04004 Y_RNA.237-201ENST00000364439 102 ntBASIC1.41□□□□□ -2.18
VTNP04004 SNORA25.9-201ENST00000365087 128 ntBASIC1.41□□□□□ -2.18
VTNP04004 RNU6-326P-201ENST00000365480 107 ntBASIC1.41□□□□□ -2.18
VTNP04004 RNU6-662P-201ENST00000384253 104 ntBASIC1.41□□□□□ -2.18
VTNP04004 MT-TW-201ENST00000387382 68 ntBASIC1.41□□□□□ -2.18
VTNP04004 RNU2-14P-201ENST00000411053 191 ntBASIC1.41□□□□□ -2.18
VTNP04004 AL161935.2-201ENST00000414627 60 ntBASIC1.41□□□□□ -2.18
VTNP04004 RPL23AP54-201ENST00000495129 419 ntBASIC1.41□□□□□ -2.18
VTNP04004 AC091959.1-201ENST00000495857 238 ntBASIC1.41□□□□□ -2.18
VTNP04004 Y_RNA.673-201ENST00000516306 88 ntBASIC1.41□□□□□ -2.18
VTNP04004 AC136628.3-201ENST00000521868 290 ntBASIC1.41□□□□□ -2.18
VTNP04004 SNORA28-201ENST00000606769 126 ntBASIC1.41□□□□□ -2.18
VTNP04004 AC021506.2-201ENST00000612354 169 ntBASIC1.41□□□□□ -2.18
VTNP04004 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.4□□□□□ -2.19
VTNP04004 Y_RNA.136-201ENST00000363444 102 ntBASIC1.4□□□□□ -2.19
VTNP04004 RNU6-801P-201ENST00000364087 105 ntBASIC1.4□□□□□ -2.19
VTNP04004 Y_RNA.483-201ENST00000384380 101 ntBASIC1.4□□□□□ -2.19
VTNP04004 MIR499A-201ENST00000384903 122 ntBASIC1.4□□□□□ -2.19
VTNP04004 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
VTNP04004 SUMO2P16-201ENST00000519475 264 ntBASIC1.4□□□□□ -2.19
VTNP04004 AC024405.2-202ENST00000532731 184 ntBASIC1.4□□□□□ -2.19
VTNP04004 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
VTNP04004 AL162424.1-201ENST00000602325 221 ntBASIC1.4□□□□□ -2.19
VTNP04004 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VTNP04004 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.4□□□□□ -2.19
VTNP04004 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
VTNP04004 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
VTNP04004 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VTNP04004 RNU4-41P-201ENST00000364426 143 ntBASIC1.39□□□□□ -2.19
VTNP04004 Y_RNA.396-201ENST00000383949 103 ntBASIC1.39□□□□□ -2.19
VTNP04004 SNORA72-201ENST00000384339 132 ntBASIC1.39□□□□□ -2.19
VTNP04004 RNU6-763P-201ENST00000390865 106 ntBASIC1.39□□□□□ -2.19
VTNP04004 SNORA26.5-201ENST00000391215 123 ntBASIC1.39□□□□□ -2.19
VTNP04004 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
VTNP04004 AC104332.1-201ENST00000440471 797 ntBASIC1.39□□□□□ -2.19
VTNP04004 U8.19-201ENST00000459095 133 ntBASIC1.39□□□□□ -2.19
VTNP04004 RNU7-141P-201ENST00000459304 62 ntBASIC1.39□□□□□ -2.19
VTNP04004 SERF1AP1-201ENST00000514575 187 ntBASIC1.39□□□□□ -2.19
VTNP04004 RNU7-116P-201ENST00000516940 62 ntBASIC1.39□□□□□ -2.19
VTNP04004 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.39□□□□□ -2.19
VTNP04004 MIR548AY-201ENST00000617669 107 ntBASIC1.39□□□□□ -2.19
VTNP04004 SNORD3E-202ENST00000627253 216 ntBASIC1.39□□□□□ -2.19
VTNP04004 RNA5SP259-201ENST00000365541 109 ntBASIC1.38□□□□□ -2.19
VTNP04004 RNU6-1323P-201ENST00000384025 107 ntBASIC1.38□□□□□ -2.19
VTNP04004 SNORA72.4-201ENST00000384174 132 ntBASIC1.38□□□□□ -2.19
VTNP04004 MIR194-1-201ENST00000384892 85 ntBASIC1.38□□□□□ -2.19
VTNP04004 RNA5SP482-201ENST00000391269 118 ntBASIC1.38□□□□□ -2.19
VTNP04004 MIR1302-3-201ENST00000408128 138 ntBASIC1.38□□□□□ -2.19
VTNP04004 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
VTNP04004 BTF3P11-201ENST00000426582 477 ntBASIC1.38□□□□□ -2.19
VTNP04004 CALM2P4-201ENST00000430810 426 ntBASIC1.38□□□□□ -2.19
VTNP04004 MTND4LP30-201ENST00000454092 297 ntBASIC1.38□□□□□ -2.19
VTNP04004 RNU7-115P-201ENST00000516433 55 ntBASIC1.38□□□□□ -2.19
VTNP04004 RNA5SP168-201ENST00000516642 112 ntBASIC1.38□□□□□ -2.19
VTNP04004 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
VTNP04004 MIR4778-201ENST00000577635 80 ntBASIC1.38□□□□□ -2.19
VTNP04004 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.38□□□□□ -2.19
VTNP04004 AP001282.2-201ENST00000616149 309 ntBASIC1.38□□□□□ -2.19
VTNP04004 AC073349.3-201ENST00000617616 186 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms