Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC013791.1-201ENST00000616619 62 ntBASIC1.87□□□□□ -2.11
LDLRP01130 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
LDLRP01130 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LDLRP01130 Y_RNA.23-201ENST00000362496 106 ntBASIC1.86□□□□□ -2.11
LDLRP01130 RNU4-84P-201ENST00000364200 139 ntBASIC1.86□□□□□ -2.11
LDLRP01130 RNU6-312P-201ENST00000364629 107 ntBASIC1.86□□□□□ -2.11
LDLRP01130 Y_RNA.310-201ENST00000365063 113 ntBASIC1.86□□□□□ -2.11
LDLRP01130 RNU4-17P-201ENST00000365598 141 ntBASIC1.86□□□□□ -2.11
LDLRP01130 SNORD116-18-201ENST00000383961 92 ntBASIC1.86□□□□□ -2.11
LDLRP01130 SNORA72.4-201ENST00000384174 132 ntBASIC1.86□□□□□ -2.11
LDLRP01130 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LDLRP01130 RNU6-131P-201ENST00000391144 107 ntBASIC1.86□□□□□ -2.11
LDLRP01130 MIR1253-201ENST00000408273 105 ntBASIC1.86□□□□□ -2.11
LDLRP01130 SEPT7P4-201ENST00000437076 306 ntBASIC1.86□□□□□ -2.11
LDLRP01130 AC245517.4-201ENST00000448601 281 ntBASIC1.86□□□□□ -2.11
LDLRP01130 ATP5J2P3-201ENST00000451550 258 ntBASIC1.86□□□□□ -2.11
LDLRP01130 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.86□□□□□ -2.11
LDLRP01130 AC011406.1-201ENST00000512440 370 ntBASIC1.86□□□□□ -2.11
LDLRP01130 SCARNA8-201ENST00000515924 131 ntBASIC1.86□□□□□ -2.11
LDLRP01130 AC025647.1-201ENST00000517879 253 ntBASIC1.86□□□□□ -2.11
LDLRP01130 MIR8070-201ENST00000616510 88 ntBASIC1.86□□□□□ -2.11
LDLRP01130 AC009487.4-201ENST00000624969 3585 ntBASIC1.86□□□□□ -2.11
LDLRP01130 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LDLRP01130 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
LDLRP01130 Y_RNA.121-201ENST00000363309 113 ntBASIC1.85□□□□□ -2.11
LDLRP01130 Y_RNA.182-201ENST00000363880 111 ntBASIC1.85□□□□□ -2.11
LDLRP01130 Y_RNA.368-201ENST00000365547 113 ntBASIC1.85□□□□□ -2.11
LDLRP01130 MIR626-201ENST00000385032 94 ntBASIC1.85□□□□□ -2.11
LDLRP01130 AC016909.1-201ENST00000415916 166 ntBASIC1.85□□□□□ -2.11
LDLRP01130 TOMM22P2-201ENST00000430735 237 ntBASIC1.85□□□□□ -2.11
LDLRP01130 HMGN2P34-201ENST00000437647 269 ntBASIC1.85□□□□□ -2.11
LDLRP01130 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
LDLRP01130 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
LDLRP01130 RNU6-453P-201ENST00000516819 85 ntBASIC1.85□□□□□ -2.11
LDLRP01130 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
LDLRP01130 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.85□□□□□ -2.11
LDLRP01130 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LDLRP01130 RNU6-862P-201ENST00000362804 105 ntBASIC1.84□□□□□ -2.11
LDLRP01130 RNY1P10-201ENST00000363268 113 ntBASIC1.84□□□□□ -2.11
LDLRP01130 RNU6-275P-201ENST00000364910 107 ntBASIC1.84□□□□□ -2.11
LDLRP01130 Y_RNA.466-201ENST00000384294 113 ntBASIC1.84□□□□□ -2.11
LDLRP01130 AL355796.1-201ENST00000406706 323 ntBASIC1.84□□□□□ -2.11
LDLRP01130 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
LDLRP01130 RNA5SP272-201ENST00000516095 111 ntBASIC1.84□□□□□ -2.11
LDLRP01130 RNVU1-2-201ENST00000516326 135 ntBASIC1.84□□□□□ -2.11
LDLRP01130 SNORD116-25-201ENST00000516517 92 ntBASIC1.84□□□□□ -2.11
LDLRP01130 RNU7-121P-201ENST00000516604 62 ntBASIC1.84□□□□□ -2.11
LDLRP01130 AC027419.1-201ENST00000522976 328 ntBASIC1.84□□□□□ -2.11
LDLRP01130 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.11
LDLRP01130 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.84□□□□□ -2.11
LDLRP01130 AC005786.1-201ENST00000588553 154 ntBASIC1.84□□□□□ -2.11
LDLRP01130 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
LDLRP01130 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LDLRP01130 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.83□□□□□ -2.12
LDLRP01130 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LDLRP01130 Y_RNA.24-201ENST00000362508 103 ntBASIC1.83□□□□□ -2.12
LDLRP01130 Y_RNA.124-201ENST00000363339 93 ntBASIC1.83□□□□□ -2.12
LDLRP01130 RNU6-1240P-201ENST00000365155 104 ntBASIC1.83□□□□□ -2.12
LDLRP01130 Y_RNA.400-201ENST00000383963 111 ntBASIC1.83□□□□□ -2.12
LDLRP01130 RNU6-417P-201ENST00000384712 107 ntBASIC1.83□□□□□ -2.12
LDLRP01130 Y_RNA.568-201ENST00000384742 113 ntBASIC1.83□□□□□ -2.12
LDLRP01130 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LDLRP01130 SNORA40.18-201ENST00000391200 128 ntBASIC1.83□□□□□ -2.12
LDLRP01130 AL158823.1-201ENST00000418441 478 ntBASIC1.83□□□□□ -2.12
LDLRP01130 AC008134.1-201ENST00000420943 193 ntBASIC1.83□□□□□ -2.12
LDLRP01130 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.83□□□□□ -2.12
LDLRP01130 RNU7-141P-201ENST00000459304 62 ntBASIC1.83□□□□□ -2.12
LDLRP01130 MIR5094-201ENST00000578766 85 ntBASIC1.83□□□□□ -2.12
LDLRP01130 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
LDLRP01130 AP001485.1-201ENST00000604799 199 ntBASIC1.83□□□□□ -2.12
LDLRP01130 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
LDLRP01130 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LDLRP01130 Y_RNA.215-201ENST00000364204 112 ntBASIC1.82□□□□□ -2.12
LDLRP01130 Y_RNA.287-201ENST00000364853 94 ntBASIC1.82□□□□□ -2.12
LDLRP01130 Y_RNA.341-201ENST00000365341 102 ntBASIC1.82□□□□□ -2.12
LDLRP01130 RNU6-449P-201ENST00000383914 107 ntBASIC1.82□□□□□ -2.12
LDLRP01130 Y_RNA.456-201ENST00000384232 111 ntBASIC1.82□□□□□ -2.12
LDLRP01130 RNU6-578P-201ENST00000390980 103 ntBASIC1.82□□□□□ -2.12
LDLRP01130 RNU6-855P-201ENST00000410395 104 ntBASIC1.82□□□□□ -2.12
LDLRP01130 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
LDLRP01130 AL162725.1-201ENST00000435405 301 ntBASIC1.82□□□□□ -2.12
LDLRP01130 AC099677.2-201ENST00000436385 175 ntBASIC1.82□□□□□ -2.12
LDLRP01130 AC005840.1-201ENST00000498412 377 ntBASIC1.82□□□□□ -2.12
LDLRP01130 MIR4744-201ENST00000581563 82 ntBASIC1.82□□□□□ -2.12
LDLRP01130 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
LDLRP01130 snoU2-30.2-201ENST00000362805 70 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RNU6-899P-201ENST00000363947 107 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RNU1-96P-201ENST00000364163 162 ntBASIC1.81□□□□□ -2.12
LDLRP01130 Y_RNA.293-201ENST00000364908 93 ntBASIC1.81□□□□□ -2.12
LDLRP01130 U8.7-201ENST00000364940 136 ntBASIC1.81□□□□□ -2.12
LDLRP01130 SNORA25.9-201ENST00000365087 128 ntBASIC1.81□□□□□ -2.12
LDLRP01130 Y_RNA.497-201ENST00000384447 98 ntBASIC1.81□□□□□ -2.12
LDLRP01130 MIR489-201ENST00000384923 84 ntBASIC1.81□□□□□ -2.12
LDLRP01130 MIR569-201ENST00000385228 96 ntBASIC1.81□□□□□ -2.12
LDLRP01130 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
LDLRP01130 MT-TT-201ENST00000387460 66 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RNU6-239P-201ENST00000390990 99 ntBASIC1.81□□□□□ -2.12
LDLRP01130 Y_RNA.586-201ENST00000391146 98 ntBASIC1.81□□□□□ -2.12
LDLRP01130 RNU6-710P-201ENST00000410424 105 ntBASIC1.81□□□□□ -2.12
LDLRP01130 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms