Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SNORA31.21-201ENST00000517180 77 ntBASIC3.68□□□□□ -1.82
ALDH1A1P00352 AP003484.1-201ENST00000530974 250 ntBASIC3.68□□□□□ -1.82
ALDH1A1P00352 uc_338.1-201ENST00000612113 180 ntBASIC3.68□□□□□ -1.82
ALDH1A1P00352 XIST_intron.1-201ENST00000619444 68 ntBASIC3.68□□□□□ -1.82
ALDH1A1P00352 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.68□□□□□ -1.82
ALDH1A1P00352 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALDH1A1P00352 Y_RNA.377-201ENST00000365644 108 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 SNORD15B-201ENST00000384714 146 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 RNU6-679P-201ENST00000391003 106 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 RNA5SP38-201ENST00000410750 119 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 RNA5SP144-201ENST00000410846 116 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 AL159169.1-201ENST00000421119 127 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 AL512326.2-201ENST00000426359 151 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.67□□□□□ -1.82
ALDH1A1P00352 RPS12P18-201ENST00000442381 270 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 SNORA18.7-201ENST00000516910 131 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.67□□□□□ -1.82
ALDH1A1P00352 AC078899.2-201ENST00000595282 212 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 AL513534.2-201ENST00000603836 250 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.67□□□□□ -1.82
ALDH1A1P00352 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
ALDH1A1P00352 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
ALDH1A1P00352 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALDH1A1P00352 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ALDH1A1P00352 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ALDH1A1P00352 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ALDH1A1P00352 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.66□□□□□ -1.82
ALDH1A1P00352 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
ALDH1A1P00352 MIR340-201ENST00000362125 95 ntBASIC3.66□□□□□ -1.82
ALDH1A1P00352 AL139132.1-201ENST00000431587 344 ntBASIC3.66□□□□□ -1.82
ALDH1A1P00352 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.66□□□□□ -1.82
ALDH1A1P00352 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.66□□□□□ -1.82
ALDH1A1P00352 AC004812.1-201ENST00000540773 146 ntBASIC3.66□□□□□ -1.82
ALDH1A1P00352 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.66□□□□□ -1.82
ALDH1A1P00352 AC022149.2-201ENST00000621061 203 ntBASIC3.66□□□□□ -1.82
ALDH1A1P00352 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ALDH1A1P00352 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
ALDH1A1P00352 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.65□□□□□ -1.82
ALDH1A1P00352 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 RNU6-652P-201ENST00000365488 107 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 Y_RNA.467-201ENST00000384297 102 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 SNORD38C-201ENST00000384381 69 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 RNA5SP252-201ENST00000391131 119 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 AC244505.4-201ENST00000434905 287 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 AC105272.1-201ENST00000438604 198 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 SSXP5-201ENST00000443473 287 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 AC093259.1-201ENST00000509755 300 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.65□□□□□ -1.83
ALDH1A1P00352 MIR4319-201ENST00000577285 85 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 MIR4762-201ENST00000585261 75 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 U6.108-201ENST00000637764 58 ntBASIC3.65□□□□□ -1.83
ALDH1A1P00352 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ALDH1A1P00352 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALDH1A1P00352 SNORA1B-201ENST00000362535 133 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 snoU2-30.2-201ENST00000362805 70 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 SNORD14E-201ENST00000364009 85 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 Y_RNA.332-201ENST00000365271 113 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 SNORA54-201ENST00000384281 123 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 RN7SKP200-201ENST00000410564 320 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 RPL32P35-201ENST00000415214 394 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 AC123900.1-201ENST00000420390 96 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 AC087499.4-201ENST00000448505 178 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 RNU6-237P-201ENST00000515985 71 ntBASIC3.64□□□□□ -1.83
ALDH1A1P00352 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALDH1A1P00352 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALDH1A1P00352 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ALDH1A1P00352 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ALDH1A1P00352 Y_RNA.4-201ENST00000362333 112 ntBASIC3.63□□□□□ -1.83
ALDH1A1P00352 AL135938.1-201ENST00000443141 297 ntBASIC3.63□□□□□ -1.83
ALDH1A1P00352 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.63□□□□□ -1.83
ALDH1A1P00352 AL049830.1-201ENST00000468034 425 ntBASIC3.63□□□□□ -1.83
ALDH1A1P00352 SNORA31.4-201ENST00000516049 129 ntBASIC3.63□□□□□ -1.83
ALDH1A1P00352 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.63□□□□□ -1.83
ALDH1A1P00352 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
ALDH1A1P00352 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ALDH1A1P00352 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
ALDH1A1P00352 U8.5-201ENST00000364528 136 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 RNU6-1201P-201ENST00000384227 107 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 RNY1P4-201ENST00000384595 115 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 MIR591-201ENST00000385290 95 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 RNA5SP467-201ENST00000391274 118 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 AL627390.1-201ENST00000396055 340 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 SNORA7.5-201ENST00000410672 110 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 Y_RNA.611-201ENST00000410682 108 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 RNU2-40P-201ENST00000410833 196 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 RNU7-170P-201ENST00000459303 61 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 uc_338.25-201ENST00000613756 156 ntBASIC3.62□□□□□ -1.83
ALDH1A1P00352 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ALDH1A1P00352 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALDH1A1P00352 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.61□□□□□ -1.83
ALDH1A1P00352 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
ALDH1A1P00352 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.61□□□□□ -1.83
ALDH1A1P00352 AC062016.1-201ENST00000355719 319 ntBASIC3.61□□□□□ -1.83
ALDH1A1P00352 RNA5SP229-201ENST00000410809 99 ntBASIC3.61□□□□□ -1.83
ALDH1A1P00352 RNA5SP508-201ENST00000411327 119 ntBASIC3.61□□□□□ -1.83
ALDH1A1P00352 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.61□□□□□ -1.83
ALDH1A1P00352 RPL23AP63-201ENST00000498752 471 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms