Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.92-201ENST00000363043 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.122-201ENST00000363331 96 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 RNU6-899P-201ENST00000363947 107 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 RNU4-10P-201ENST00000364383 140 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.235-201ENST00000364412 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.306-201ENST00000365015 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.312-201ENST00000365089 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.322-201ENST00000365151 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 SNORA72-201ENST00000384339 132 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.478-201ENST00000384358 107 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.489-201ENST00000384410 101 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 SNORA36B-201ENST00000410438 131 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.650-201ENST00000459002 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 RNU7-94P-201ENST00000459576 63 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 RNU2-56P-201ENST00000516826 190 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.777-201ENST00000516982 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 RNU6-388P-201ENST00000517012 105 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 RNU6-389P-201ENST00000517048 105 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 MIR4769-201ENST00000584126 77 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.771-201ENST00000598668 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 BX284668.6-201ENST00000606899 438 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 MIR8054-201ENST00000620877 86 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 AC078938.1-201ENST00000620993 318 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.789-201ENST00000622480 102 ntBASIC1.53□□□□□ -2.16
CLPTM1O96005 Y_RNA.293-201ENST00000364908 93 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 RNU6-439P-201ENST00000384188 106 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CLPTM1O96005 SNORA12.1-201ENST00000390873 148 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 AC009310.1-201ENST00000414414 451 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 STAG3L5P-204ENST00000443759 179 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.52□□□□□ -2.17
CLPTM1O96005 Y_RNA.638-201ENST00000459374 113 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 RNU7-34P-201ENST00000459394 64 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.52□□□□□ -2.17
CLPTM1O96005 RNU7-116P-201ENST00000516940 62 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.52□□□□□ -2.17
CLPTM1O96005 MIR5692C2-201ENST00000577959 77 ntBASIC1.52□□□□□ -2.17
CLPTM1O96005 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CLPTM1O96005 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLPTM1O96005 RNU6-1205P-201ENST00000363625 106 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 Y_RNA.476-201ENST00000384347 108 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 MT-TG-201ENST00000387429 68 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 RNU6-440P-201ENST00000390882 105 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 RNU11-5P-201ENST00000391216 129 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 MIR1278-201ENST00000408753 81 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 RNU6-383P-201ENST00000410864 94 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPTM1O96005 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.51□□□□□ -2.17
CLPTM1O96005 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 RNU6-548P-201ENST00000517083 115 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 AP002004.2-201ENST00000531656 154 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 MIR4282-201ENST00000583613 67 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 AL442067.1-201ENST00000613261 223 ntBASIC1.51□□□□□ -2.17
CLPTM1O96005 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLPTM1O96005 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CLPTM1O96005 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
CLPTM1O96005 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
CLPTM1O96005 Y_RNA.265-201ENST00000364677 108 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 Y_RNA.292-201ENST00000364904 97 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 HMGN2P23-201ENST00000456759 269 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 snoU13.27-201ENST00000459278 104 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 RNU6-437P-201ENST00000459408 95 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 AC108210.2-201ENST00000503681 201 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 AC015712.3-201ENST00000559380 164 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 AC011921.3-201ENST00000605540 361 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 AC073349.3-201ENST00000617616 186 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLPTM1O96005 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLPTM1O96005 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
CLPTM1O96005 Y_RNA.253-201ENST00000364562 112 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 Y_RNA.572-201ENST00000384757 98 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CLPTM1O96005 SNORD58.1-201ENST00000391313 66 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 COX6CP10-201ENST00000416832 224 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 snoU13.23-201ENST00000458863 104 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AL049830.1-201ENST00000468034 425 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.49□□□□□ -2.17
CLPTM1O96005 RNU4-71P-201ENST00000516258 113 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 RNU6-250P-201ENST00000516958 103 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AC100767.1-201ENST00000528178 123 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 MIR4709-201ENST00000577272 72 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
CLPTM1O96005 AC090425.1-201ENST00000610007 140 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 AL591926.4-201ENST00000616895 298 ntBASIC1.49□□□□□ -2.17
CLPTM1O96005 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLPTM1O96005 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
CLPTM1O96005 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
CLPTM1O96005 Y_RNA.203-201ENST00000364106 102 ntBASIC1.48□□□□□ -2.17
CLPTM1O96005 RNU4-41P-201ENST00000364426 143 ntBASIC1.48□□□□□ -2.17
CLPTM1O96005 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms