Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 U6.92-201ENST00000636464 89 ntBASIC0.64□□□□□ -2.31
UPK3AO75631 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
UPK3AO75631 Y_RNA.146-201ENST00000363549 102 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 Y_RNA.329-201ENST00000365209 107 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 AC117470.1-201ENST00000381974 330 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 SNORA72-201ENST00000384339 132 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 Y_RNA.474-201ENST00000384341 102 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 MIR15B-201ENST00000385045 98 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 RNU6-855P-201ENST00000410395 104 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 MIR4764-201ENST00000580680 88 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 AC131055.1-201ENST00000584626 316 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
UPK3AO75631 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK3AO75631 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
UPK3AO75631 AL442644.1-201ENST00000454390 3105 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 Y_RNA.230-201ENST00000364348 109 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 Y_RNA.259-201ENST00000364619 101 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 MIR1185-1-201ENST00000408598 86 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 SNRPGP10-201ENST00000432323 225 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 AC099799.1-201ENST00000439809 192 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 HMGN2P32-201ENST00000444648 269 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 RN7SKP295-201ENST00000517264 153 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 SEPT14P17-201ENST00000617978 177 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 MTND4LP32-201ENST00000636111 270 ntBASIC0.62□□□□□ -2.31
UPK3AO75631 Y_RNA.27-201ENST00000362540 103 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 RNU6-490P-201ENST00000362985 107 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 RNA5SP48-201ENST00000363969 126 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 SNORD50B-201ENST00000364995 70 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 RNU6-1175P-201ENST00000365200 107 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 RNU6-342P-201ENST00000384521 104 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 MIR559-201ENST00000385188 96 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
UPK3AO75631 MCFD2P1-201ENST00000417812 300 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 AC098614.3-201ENST00000438957 440 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 SNORD123-201ENST00000459473 70 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 Y_RNA.714-201ENST00000517065 90 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 RNU6-699P-201ENST00000517081 110 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 AP003716.2-201ENST00000528260 108 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 AC109810.1-201ENST00000534066 224 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 AC022441.3-201ENST00000605737 136 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.61□□□□□ -2.31
UPK3AO75631 AC138305.3-201ENST00000624988 240 ntBASIC0.61□□□□□ -2.31
UPK3AO75631 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
UPK3AO75631 RNU6-1335P-201ENST00000365426 107 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 U8.19-201ENST00000459095 133 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 RN7SKP164-201ENST00000516138 266 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 RNU6-911P-201ENST00000516523 104 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK3AO75631 AC006600.1-201ENST00000572529 153 ntBASIC0.6□□□□□ -2.31
UPK3AO75631 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
UPK3AO75631 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
UPK3AO75631 AC068700.1-201ENST00000565862 3754 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 Y_RNA.36-201ENST00000362602 112 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 SNORD14E-201ENST00000364009 85 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 Y_RNA.341-201ENST00000365341 102 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 RNU6-710P-201ENST00000410424 105 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK3AO75631 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 AC113410.1-201ENST00000505029 247 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 RNA5SP480-201ENST00000516840 109 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 AC133485.1-201ENST00000567176 124 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
UPK3AO75631 RNU1-133P-201ENST00000364867 167 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 Y_RNA.368-201ENST00000365547 113 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 Y_RNA.387-201ENST00000383918 102 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 Y_RNA.570-201ENST00000384750 101 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 RNY4P36-201ENST00000391116 96 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 AL590004.1-201ENST00000405321 300 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.58□□□□□ -2.32
UPK3AO75631 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.58□□□□□ -2.32
UPK3AO75631 AC067940.1-201ENST00000458411 300 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 AC093027.1-201ENST00000546698 429 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 VN1R91P-201ENST00000594377 169 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 AL355073.2-201ENST00000612106 557 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 AC025253.1-201ENST00000613623 543 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 7SK.10-201ENST00000621414 298 ntBASIC0.58□□□□□ -2.32
UPK3AO75631 Y_RNA.331-201ENST00000365267 102 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 RNU6-1040P-201ENST00000383974 107 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 RNU6-1323P-201ENST00000384025 107 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 RNU6-994P-201ENST00000410507 111 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 SNORA20.3-201ENST00000516880 132 ntBASIC0.57□□□□□ -2.32
UPK3AO75631 MIR4714-201ENST00000580728 77 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms