Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-453P-201ENST00000516819 85 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 AC084364.2-201ENST00000546924 395 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 SUB1P4-201ENST00000566062 339 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 MIR2681-201ENST00000581814 105 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 AC069114.2-201ENST00000604699 304 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS4BO75351 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
VPS4BO75351 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS4BO75351 Y_RNA.23-201ENST00000362496 106 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 Y_RNA.796-201ENST00000364268 102 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 SNORA63D-201ENST00000364359 132 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 RNU6-275P-201ENST00000364910 107 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 Y_RNA.799-201ENST00000364992 102 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 RNU6-578P-201ENST00000390980 103 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 RNU6-1228P-201ENST00000391014 107 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 RN7SKP51-201ENST00000410781 304 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 AC074198.2-201ENST00000508153 258 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 RNVU1-2-201ENST00000516326 135 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
VPS4BO75351 AC108706.1-201ENST00000611053 297 ntBASIC2.16□□□□□ -2.06
VPS4BO75351 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.06
VPS4BO75351 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS4BO75351 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
VPS4BO75351 AL606517.2-201ENST00000442855 241 ntBASIC2.15□□□□□ -2.07
VPS4BO75351 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
VPS4BO75351 SNORD11-201ENST00000459124 84 ntBASIC2.15□□□□□ -2.07
VPS4BO75351 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS4BO75351 AP002004.2-201ENST00000531656 154 ntBASIC2.15□□□□□ -2.07
VPS4BO75351 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
VPS4BO75351 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS4BO75351 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS4BO75351 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 RNU6-1209P-201ENST00000363655 107 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 Y_RNA.182-201ENST00000363880 111 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 AL512604.1-201ENST00000404812 257 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 RNA5SP501-201ENST00000410990 112 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 AC069257.2-201ENST00000441819 155 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS4BO75351 AC005840.1-201ENST00000498412 377 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 RNU6-1291P-201ENST00000516591 104 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 MIR5094-201ENST00000578766 85 ntBASIC2.14□□□□□ -2.07
VPS4BO75351 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VPS4BO75351 SNORA1B-201ENST00000362535 133 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 RNU4-41P-201ENST00000364426 143 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 RNU6-1080P-201ENST00000383982 107 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 MT-TT-201ENST00000387460 66 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 AL606845.1-201ENST00000404881 255 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 RNU4-43P-201ENST00000410628 137 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 RNU6-394P-201ENST00000410735 107 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 AC245047.8-201ENST00000456455 284 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 AC108729.3-201ENST00000513484 108 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 RNU2-19P-201ENST00000517288 84 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 AC109810.1-201ENST00000534066 224 ntBASIC2.13□□□□□ -2.07
VPS4BO75351 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VPS4BO75351 Y_RNA.253-201ENST00000364562 112 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 RNU6-296P-201ENST00000384608 107 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS4BO75351 RNU2-55P-201ENST00000411146 174 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 RNU5E-9P-201ENST00000411164 104 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 HMGN1P7-201ENST00000491722 313 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 Y_RNA.797-201ENST00000515977 94 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS4BO75351 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS4BO75351 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS4BO75351 U1.36-201ENST00000620684 176 ntBASIC2.12□□□□□ -2.07
VPS4BO75351 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 Y_RNA.267-201ENST00000364679 109 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 RNA5SP109-201ENST00000391010 116 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 RNU6-1135P-201ENST00000411083 103 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS4BO75351 AC233266.1-201ENST00000454518 96 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS4BO75351 RPL23AP91-201ENST00000569211 455 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 MIR4431-201ENST00000579990 94 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 MIR4762-201ENST00000585261 75 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 AC242852.1-201ENST00000612151 96 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 AC244015.1-201ENST00000622301 99 ntBASIC2.11□□□□□ -2.07
VPS4BO75351 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
VPS4BO75351 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS4BO75351 AC245047.3-201ENST00000429428 127 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 AL049830.1-201ENST00000468034 425 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 SNORD77.4-201ENST00000516158 81 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 SNORA31.10-201ENST00000516482 106 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 RNU6-1007P-201ENST00000516586 107 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 RNU7-28P-201ENST00000516759 62 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 AL160236.1-201ENST00000556317 195 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 uc_338.4-201ENST00000616635 176 ntBASIC2.1□□□□□ -2.07
VPS4BO75351 MIR8054-201ENST00000620877 86 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms