Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL359075.3-201ENST00000613288 217 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 Pinc.1-201ENST00000616452 154 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 AC064859.1-201ENST00000624741 174 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 MIR7153-201ENST00000637758 57 ntBASIC3.43□□□□□ -1.86
PTCD1O75127 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTCD1O75127 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCD1O75127 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCD1O75127 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCD1O75127 Y_RNA.486-201ENST00000384398 107 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 RNU11-5P-201ENST00000391216 129 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 MIR1302-5-201ENST00000408164 150 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCD1O75127 RNA5SP127-201ENST00000411051 133 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 SRIP3-201ENST00000413200 219 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 RPS29P6-201ENST00000438196 145 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 AP004217.1-201ENST00000480579 346 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 RNA5SP281-201ENST00000516504 135 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 RNU7-149P-201ENST00000516739 59 ntBASIC3.42□□□□□ -1.86
PTCD1O75127 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCD1O75127 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.42□□□□□ -1.86
PTCD1O75127 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCD1O75127 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCD1O75127 MIR26A1-201ENST00000362205 77 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 Y_RNA.267-201ENST00000364679 109 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 Y_RNA.323-201ENST00000365157 109 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 Y_RNA.366-201ENST00000365540 102 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 MIR562-201ENST00000384894 95 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 RNA5SP323-201ENST00000391094 133 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 AF228730.3-201ENST00000436691 102 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 AC009238.1-201ENST00000442165 424 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 AC009237.6-201ENST00000446969 424 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 OR9P1P-201ENST00000496431 281 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 RNA5SP24-201ENST00000516478 95 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCD1O75127 MIR3129-201ENST00000581095 76 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 RNU6-94P-201ENST00000607728 107 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 MIR338-201ENST00000636369 67 ntBASIC3.41□□□□□ -1.86
PTCD1O75127 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.41□□□□□ -1.86
PTCD1O75127 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCD1O75127 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PTCD1O75127 MIR494-201ENST00000349529 81 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 RNA5SP289-201ENST00000362332 137 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 Y_RNA.99-201ENST00000363138 105 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 RNY1P10-201ENST00000363268 113 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCD1O75127 RNU6-1152P-201ENST00000384576 107 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 RNU6-1072P-201ENST00000384703 107 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 RNU6-443P-201ENST00000384780 107 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PTCD1O75127 SNORA26-201ENST00000391286 122 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 SNORA3.2-201ENST00000408221 125 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 RNA5SP225-201ENST00000410874 135 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 AC104332.2-201ENST00000429959 156 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 Y_RNA.685-201ENST00000516532 108 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 RNU7-128P-201ENST00000517247 62 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 AL355596.1-201ENST00000565399 3996 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 AL365205.2-201ENST00000594586 68 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.4□□□□□ -1.87
PTCD1O75127 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCD1O75127 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCD1O75127 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCD1O75127 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
PTCD1O75127 SNORD114-6-201ENST00000364393 72 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCD1O75127 AL353689.1-201ENST00000438895 199 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 AL445687.1-201ENST00000439946 251 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 ATP5J2P3-201ENST00000451550 258 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 RNU1-142P-201ENST00000516682 145 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCD1O75127 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 MIR6079-201ENST00000635807 62 ntBASIC3.39□□□□□ -1.87
PTCD1O75127 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCD1O75127 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCD1O75127 RNU6-160P-201ENST00000384591 107 ntBASIC3.38□□□□□ -1.87
PTCD1O75127 SNORD78.1-201ENST00000390866 65 ntBASIC3.38□□□□□ -1.87
PTCD1O75127 SNRPGP10-201ENST00000432323 225 ntBASIC3.38□□□□□ -1.87
PTCD1O75127 RNA5SP320-201ENST00000516263 124 ntBASIC3.38□□□□□ -1.87
PTCD1O75127 RNU6-970P-201ENST00000516312 107 ntBASIC3.38□□□□□ -1.87
PTCD1O75127 MIR4662B-201ENST00000579498 81 ntBASIC3.38□□□□□ -1.87
PTCD1O75127 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCD1O75127 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCD1O75127 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.37□□□□□ -1.87
PTCD1O75127 SNORA33-201ENST00000363664 130 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 SNORD114-30-201ENST00000364448 72 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 Y_RNA.544-201ENST00000384650 113 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 MT-TI-201ENST00000387365 69 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 RNU6-972P-201ENST00000391208 107 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 MIR1262-201ENST00000408276 93 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 HMGN1P7-201ENST00000491722 313 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCD1O75127 MIR4635-201ENST00000583759 79 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 AC015726.2-201ENST00000620112 122 ntBASIC3.37□□□□□ -1.87
PTCD1O75127 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTCD1O75127 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
PTCD1O75127 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCD1O75127 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTCD1O75127 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.36□□□□□ -1.87
PTCD1O75127 RNU6-228P-201ENST00000362700 106 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms