Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 Y_RNA.272-201ENST00000364696 102 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RNU4-52P-201ENST00000384209 138 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 MIR583-201ENST00000384846 75 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 SNORA40.19-201ENST00000390846 128 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RNA5SP247-201ENST00000411181 105 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RN7SKP101-201ENST00000411376 320 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 AL445646.1-201ENST00000431784 216 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1BO60663 AL392103.1-201ENST00000447000 198 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1BO60663 RNU6-437P-201ENST00000459408 95 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RPL23AP54-201ENST00000495129 419 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RNU6-1278P-201ENST00000516130 107 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RNU7-99P-201ENST00000516271 62 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 RNU7-121P-201ENST00000516604 62 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.75□□□□□ -2.13
LMX1BO60663 AC109810.1-201ENST00000534066 224 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 MIR4724-201ENST00000579485 89 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 AL391903.3-201ENST00000612158 163 ntBASIC1.75□□□□□ -2.13
LMX1BO60663 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1BO60663 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
LMX1BO60663 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LMX1BO60663 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1BO60663 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
LMX1BO60663 RNY1P5-201ENST00000383890 115 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 RNU6-160P-201ENST00000384591 107 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 RNU4-61P-201ENST00000411243 107 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.74□□□□□ -2.13
LMX1BO60663 Y_RNA.797-201ENST00000515977 94 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 RNU6-406P-201ENST00000516470 107 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 Y_RNA.703-201ENST00000516846 111 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 AP000942.3-201ENST00000603702 160 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 AC073413.2-201ENST00000604332 360 ntBASIC1.74□□□□□ -2.13
LMX1BO60663 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.74□□□□□ -2.13
LMX1BO60663 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LMX1BO60663 AC100821.1-201ENST00000523153 2479 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 Y_RNA.8-201ENST00000362353 102 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 RNU6-862P-201ENST00000362804 105 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 Y_RNA.796-201ENST00000364268 102 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 Y_RNA.799-201ENST00000364992 102 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 AL606845.1-201ENST00000404881 255 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 MIR1253-201ENST00000408273 105 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 RNU6-1186P-201ENST00000410429 97 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 ATP5J2P3-201ENST00000451550 258 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.73□□□□□ -2.13
LMX1BO60663 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.73□□□□□ -2.13
LMX1BO60663 RPS26P45-201ENST00000471748 340 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 RPS27P21-201ENST00000486977 252 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 RNU6-1007P-201ENST00000516586 107 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
LMX1BO60663 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
LMX1BO60663 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LMX1BO60663 MIR367-201ENST00000362299 68 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 Y_RNA.164-201ENST00000363709 102 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 RNU6-1228P-201ENST00000391014 107 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 MIR1283-2-201ENST00000408621 87 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 BX510359.4-201ENST00000423750 193 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 AC010154.1-201ENST00000425857 269 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 SNRPGP8-201ENST00000454064 226 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 AC005840.1-201ENST00000498412 377 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 AC108729.3-201ENST00000513484 108 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 RNU6-1146P-201ENST00000516282 102 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 RNA5SP364-201ENST00000516938 78 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 RNU6-1096P-201ENST00000517089 102 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 AC011604.1-201ENST00000545978 196 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
LMX1BO60663 MIR4431-201ENST00000579990 94 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 AC007229.1-201ENST00000590455 412 ntBASIC1.72□□□□□ -2.13
LMX1BO60663 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LMX1BO60663 RNU1-17P-201ENST00000363022 152 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 RNU4-13P-201ENST00000364019 141 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 Y_RNA.203-201ENST00000364106 102 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 RNU6-376P-201ENST00000384731 106 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 SNORD23.1-201ENST00000408212 104 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 HMGN2P38-201ENST00000423806 265 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 AL606517.2-201ENST00000442855 241 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 RPS27P1-201ENST00000450552 247 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 SNORD11-201ENST00000459124 84 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 AL163195.1-201ENST00000496941 348 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 RNA5SP137-201ENST00000516833 135 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 AL359075.3-201ENST00000613288 217 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 MIR6079-201ENST00000635807 62 ntBASIC1.71□□□□□ -2.14
LMX1BO60663 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LMX1BO60663 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
LMX1BO60663 AL157777.2-201ENST00000258070 137 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 Y_RNA.4-201ENST00000362333 112 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 SNORD115-3-201ENST00000363100 82 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 RNU6-1209P-201ENST00000363655 107 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 RNU6-1080P-201ENST00000383982 107 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 RNU6-239P-201ENST00000390990 99 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 RNA5SP496-201ENST00000391240 109 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 RNU4-43P-201ENST00000410628 137 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 CST2P1-201ENST00000425770 87 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 MIR3910-1-201ENST00000580936 111 ntBASIC1.7□□□□□ -2.14
LMX1BO60663 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms