Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 Y_RNA.441-201ENST00000384123 112 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 RNA5SP482-201ENST00000391269 118 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 SEPT7P4-201ENST00000437076 306 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.29□□□□□ -2.04
KDM1AO60341 STAG3L5P-204ENST00000443759 179 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 AL121914.1-201ENST00000450188 156 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 SNORD77.4-201ENST00000516158 81 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 RNU7-28P-201ENST00000516759 62 ntBASIC2.29□□□□□ -2.04
KDM1AO60341 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.28□□□□□ -2.04
KDM1AO60341 MIR449A-201ENST00000362113 91 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 U8.5-201ENST00000364528 136 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 RNU6-131P-201ENST00000391144 107 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 RNU2-7P-201ENST00000410794 178 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 HSPE1P9-201ENST00000440046 311 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.28□□□□□ -2.04
KDM1AO60341 NDUFA4P2-201ENST00000489989 244 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.28□□□□□ -2.04
KDM1AO60341 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 SNORA31.10-201ENST00000516482 106 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 Y_RNA.714-201ENST00000517065 90 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 MIR4431-201ENST00000579990 94 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 MIR5007-201ENST00000583098 95 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 AC087685.1-201ENST00000587507 141 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 SNORA28-201ENST00000606769 126 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
KDM1AO60341 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.28□□□□□ -2.04
KDM1AO60341 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KDM1AO60341 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 SNORD68-201ENST00000363214 84 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 SNORD45.3-201ENST00000363836 72 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 SNORA4.2-201ENST00000365313 147 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 Y_RNA.357-201ENST00000365487 109 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 MIR522-201ENST00000385071 87 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 SNORA12.1-201ENST00000390873 148 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 RN7SKP200-201ENST00000410564 320 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 RNU4-43P-201ENST00000410628 137 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 Y_RNA.622-201ENST00000411091 108 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 RNU2-55P-201ENST00000411146 174 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.27□□□□□ -2.05
KDM1AO60341 AL158823.1-201ENST00000418441 478 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.27□□□□□ -2.05
KDM1AO60341 AL356320.1-201ENST00000429616 163 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 RNU6-561P-201ENST00000516222 102 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 MIR4762-201ENST00000585261 75 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
KDM1AO60341 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KDM1AO60341 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KDM1AO60341 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KDM1AO60341 RNU4-84P-201ENST00000364200 139 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 RNU6-643P-201ENST00000384018 107 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 Y_RNA.432-201ENST00000384087 111 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 RNU4-53P-201ENST00000410828 140 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 MLLT10P1-201ENST00000418346 262 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 OR9P1P-201ENST00000496431 281 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 AC107027.2-201ENST00000512197 115 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 RNA5SP481-201ENST00000516814 122 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 MIR4662B-201ENST00000579498 81 ntBASIC2.26□□□□□ -2.05
KDM1AO60341 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.25□□□□□ -2.05
KDM1AO60341 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KDM1AO60341 Y_RNA.272-201ENST00000364696 102 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 RNU6-1138P-201ENST00000365359 106 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 RNU6-484P-201ENST00000384016 107 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 SNORA67.4-201ENST00000384688 142 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 RNU6-1135P-201ENST00000411083 103 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 FTH1P12-201ENST00000432137 551 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 RNU7-149P-201ENST00000516739 59 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 AC091544.4-201ENST00000555268 342 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 MIR4448-201ENST00000584360 86 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 AC008507.4-201ENST00000585464 127 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 AC104465.1-201ENST00000611365 139 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.25□□□□□ -2.05
KDM1AO60341 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
KDM1AO60341 AL034345.1-201ENST00000407768 123 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 SNORA79-201ENST00000408376 140 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 RNU6-394P-201ENST00000410735 107 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 SNRPGP8-201ENST00000454064 226 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 RNU7-34P-201ENST00000459394 64 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 RNU6-1299P-201ENST00000516316 100 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 RNU6-126P-201ENST00000516685 103 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.24□□□□□ -2.05
KDM1AO60341 AL590808.1-201ENST00000618696 141 ntBASIC2.24□□□□□ -2.05
KDM1AO60341 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
KDM1AO60341 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
KDM1AO60341 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
KDM1AO60341 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.23□□□□□ -2.05
KDM1AO60341 Y_RNA.242-201ENST00000364473 110 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 RNU6-804P-201ENST00000384286 107 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 RNU6-239P-201ENST00000390990 99 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 snoU13.27-201ENST00000459278 104 ntBASIC2.23□□□□□ -2.05
KDM1AO60341 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.23□□□□□ -2.05
KDM1AO60341 MRPS17P9-201ENST00000511924 393 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms