Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.74□□□□□ -1.81
ACTN4O43707 RNA5SP119-201ENST00000362715 117 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 RNA5SP387-201ENST00000364226 106 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 RNU6-616P-201ENST00000384353 107 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 RNA5SP229-201ENST00000410809 99 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 RNU2-40P-201ENST00000410833 196 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 POLR2J4-204ENST00000418424 324 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.74□□□□□ -1.81
ACTN4O43707 RNU1-143P-201ENST00000516296 146 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 AC026403.1-201ENST00000518938 295 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 AC034105.4-201ENST00000568304 277 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 ZNF861P-201ENST00000588126 639 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 U1.23-201ENST00000610293 146 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 RNU1-68P-201ENST00000615382 146 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 U1.39-201ENST00000621562 146 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 AC006160.2-201ENST00000637708 154 ntBASIC3.74□□□□□ -1.81
ACTN4O43707 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ACTN4O43707 AC096644.4-201ENST00000563417 2912 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ACTN4O43707 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ACTN4O43707 Y_RNA.4-201ENST00000362333 112 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 SNORD116-10-201ENST00000363791 102 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 MIR95-201ENST00000385072 81 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 RNU6-788P-201ENST00000390967 104 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 RNU2-48P-201ENST00000410694 191 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 ATP5J2P3-201ENST00000451550 258 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 CYCSP35-201ENST00000451978 304 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 TRBV12-1-201ENST00000479785 344 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 SNORA31.4-201ENST00000516049 129 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.73□□□□□ -1.81
ACTN4O43707 AC073476.4-201ENST00000628409 72 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.73□□□□□ -1.81
ACTN4O43707 AC110079.1-202ENST00000635213 138 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 AL512310.12-203ENST00000640543 90 ntBASIC3.73□□□□□ -1.81
ACTN4O43707 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ACTN4O43707 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
ACTN4O43707 AL355596.1-201ENST00000565399 3996 ntBASIC3.72□□□□□ -1.81
ACTN4O43707 Y_RNA.171-201ENST00000363760 102 ntBASIC3.72□□□□□ -1.81
ACTN4O43707 SNORA48.11-201ENST00000517015 89 ntBASIC3.72□□□□□ -1.81
ACTN4O43707 MIR1254-2-201ENST00000579553 63 ntBASIC3.72□□□□□ -1.81
ACTN4O43707 MIR7515-201ENST00000637837 67 ntBASIC3.72□□□□□ -1.81
ACTN4O43707 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.72□□□□□ -1.81
ACTN4O43707 AC092881.1-201ENST00000638218 2733 ntBASIC3.72□□□□□ -1.81
ACTN4O43707 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ACTN4O43707 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ACTN4O43707 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.71□□□□□ -1.82
ACTN4O43707 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ACTN4O43707 SNORD56.3-201ENST00000363507 71 ntBASIC3.71□□□□□ -1.82
ACTN4O43707 SNORA48.7-201ENST00000391302 135 ntBASIC3.71□□□□□ -1.82
ACTN4O43707 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTN4O43707 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.71□□□□□ -1.82
ACTN4O43707 AC090821.2-201ENST00000523552 176 ntBASIC3.71□□□□□ -1.82
ACTN4O43707 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTN4O43707 AC245060.5-201ENST00000610778 3293 ntBASIC3.71□□□□□ -1.82
ACTN4O43707 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.71□□□□□ -1.82
ACTN4O43707 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ACTN4O43707 Y_RNA.191-201ENST00000363972 113 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 SNORA25.6-201ENST00000364121 118 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 SNORD58A-201ENST00000383875 65 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 U8.15-201ENST00000390947 134 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 RNA5SP293-201ENST00000410527 113 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 RN7SL636P-201ENST00000497504 294 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.7□□□□□ -1.82
ACTN4O43707 SNORA64.4-201ENST00000516632 81 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 MIR4439-201ENST00000583746 80 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 ELOCP29-201ENST00000588193 334 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 AL356280.1-201ENST00000603614 379 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 uc_338.1-201ENST00000612113 180 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 uc_338.25-201ENST00000613756 156 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 MIR548BB-201ENST00000626714 66 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ACTN4O43707 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ACTN4O43707 AL353746.1-201ENST00000566293 6881 ntBASIC3.7□□□□□ -1.82
ACTN4O43707 SNORA62.3-201ENST00000365110 153 ntBASIC3.69□□□□□ -1.82
ACTN4O43707 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ACTN4O43707 RPL32P35-201ENST00000415214 394 ntBASIC3.69□□□□□ -1.82
ACTN4O43707 RNU7-28P-201ENST00000516759 62 ntBASIC3.69□□□□□ -1.82
ACTN4O43707 SNORD115-34-201ENST00000362441 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-12-201ENST00000362583 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-29-201ENST00000362834 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-9-201ENST00000362912 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-21-201ENST00000362963 81 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-14-201ENST00000363090 81 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-41-201ENST00000363608 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-11-201ENST00000363616 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-5-201ENST00000363633 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-39-201ENST00000363694 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-4-201ENST00000363810 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-6-201ENST00000363942 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-42-201ENST00000364273 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORA1.1-201ENST00000364671 133 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-15-201ENST00000364809 81 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-26-201ENST00000365067 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-10-201ENST00000365073 81 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-43-201ENST00000365503 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 SNORD115-36-201ENST00000365629 82 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 RNU6-163P-201ENST00000384396 106 ntBASIC3.68□□□□□ -1.82
ACTN4O43707 Y_RNA.494-201ENST00000384432 111 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms