Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 SNORA69.1-201ENST00000390904 137 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 RNU2-54P-201ENST00000410299 190 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 RNU2-61P-201ENST00000411069 191 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.49□□□□□ -2.33
CHMP2AO43633 MTCO3P10-201ENST00000455912 772 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 AC098869.1-201ENST00000481627 292 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 AC116353.2-201ENST00000505332 712 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.49□□□□□ -2.33
CHMP2AO43633 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 AC005972.2-201ENST00000604690 348 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 AC134026.1-201ENST00000623249 2239 ntBASIC0.49□□□□□ -2.33
CHMP2AO43633 AC068700.1-201ENST00000565862 3754 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 Y_RNA.329-201ENST00000365209 107 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 AC117470.1-201ENST00000381974 330 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 MIR136-201ENST00000385207 82 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CHMP2AO43633 AL590004.1-201ENST00000405321 300 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 AC015818.7-201ENST00000428754 109 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 AC087499.7-201ENST00000441958 109 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 snoU13.21-201ENST00000459368 105 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 SNORA70.12-201ENST00000516084 153 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.48□□□□□ -2.33
CHMP2AO43633 MIR548AR-201ENST00000582191 57 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CHMP2AO43633 MIR6516-201ENST00000630554 81 ntBASIC0.48□□□□□ -2.33
CHMP2AO43633 Y_RNA.146-201ENST00000363549 102 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 RNU6-1188P-201ENST00000363795 107 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 Y_RNA.368-201ENST00000365547 113 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 RNU6-1310P-201ENST00000384153 107 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 MIR1278-201ENST00000408753 81 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.47□□□□□ -2.33
CHMP2AO43633 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.47□□□□□ -2.33
CHMP2AO43633 Y_RNA.655-201ENST00000515919 96 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 MIR4659A-201ENST00000580269 81 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 AC005176.2-201ENST00000596933 147 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 AC098679.4-201ENST00000624241 654 ntBASIC0.47□□□□□ -2.33
CHMP2AO43633 Y_RNA.160-201ENST00000363677 92 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.46□□□□□ -2.34
CHMP2AO43633 AC010655.3-201ENST00000478818 450 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 AC006380.1-201ENST00000603598 186 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 AC138305.3-201ENST00000624988 240 ntBASIC0.46□□□□□ -2.34
CHMP2AO43633 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
CHMP2AO43633 Y_RNA.6-201ENST00000362350 114 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 SNORD114-7-201ENST00000362520 77 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 SNORD81.2-201ENST00000365153 76 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 RNU6-342P-201ENST00000384521 104 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 Y_RNA.577-201ENST00000384794 101 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 MIR625-201ENST00000385047 85 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 SNORA75.6-201ENST00000391318 127 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 AL392103.1-201ENST00000447000 198 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 MIR3145-201ENST00000580727 82 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 AC005899.2-201ENST00000584353 90 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 U6.92-201ENST00000636464 89 ntBASIC0.45□□□□□ -2.34
CHMP2AO43633 RNU6-845P-201ENST00000362578 103 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 SNORA2B-201ENST00000384583 137 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 RNU6-131P-201ENST00000391144 107 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 RNU6-855P-201ENST00000410395 104 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 FCF1P4-201ENST00000448326 183 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 SUMO1P2-201ENST00000452524 304 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 NDUFA4P2-201ENST00000489989 244 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.44□□□□□ -2.34
CHMP2AO43633 RNU6-470P-201ENST00000515954 104 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 RNU4-57P-201ENST00000515980 135 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 Y_RNA.691-201ENST00000516611 103 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.44□□□□□ -2.34
CHMP2AO43633 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 AC008133.2-201ENST00000624540 351 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 MIR4251-201ENST00000635819 61 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 MTND4LP32-201ENST00000636111 270 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 TPTEP1-208ENST00000636884 213 ntBASIC0.44□□□□□ -2.34
CHMP2AO43633 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.44□□□□□ -2.34
CHMP2AO43633 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CHMP2AO43633 RNU6-369P-201ENST00000362515 102 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 SNORD81.1-201ENST00000363064 77 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 RNU6-1048P-201ENST00000364054 107 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 Y_RNA.813-201ENST00000364639 102 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 Y_RNA.279-201ENST00000364763 95 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 snoU2-30.1-201ENST00000365012 70 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 Y_RNA.314-201ENST00000365114 102 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 SNORA72-201ENST00000384339 132 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 RNU6-994P-201ENST00000410507 111 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 Y_RNA.605-201ENST00000410577 105 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 AF228730.4-201ENST00000421457 183 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 U7.7-201ENST00000459276 60 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 DEFB117-201ENST00000602356 141 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 AC022306.2-201ENST00000617563 647 ntBASIC0.43□□□□□ -2.34
CHMP2AO43633 Y_RNA.112-201ENST00000363250 102 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 RNU6-1175P-201ENST00000365200 107 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 Y_RNA.393-201ENST00000383936 102 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
CHMP2AO43633 Y_RNA.474-201ENST00000384341 102 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms