Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RN7SL636P-201ENST00000497504 294 ntBASIC2.23□□□□□ -2.05
PROM1O43490 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
PROM1O43490 RNU6-1291P-201ENST00000516591 104 ntBASIC2.23□□□□□ -2.05
PROM1O43490 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.23□□□□□ -2.05
PROM1O43490 DEFB122-202ENST00000569013 197 ntBASIC2.23□□□□□ -2.05
PROM1O43490 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
PROM1O43490 MIR2681-201ENST00000581814 105 ntBASIC2.23□□□□□ -2.05
PROM1O43490 DNAJC19P2-201ENST00000593340 302 ntBASIC2.23□□□□□ -2.05
PROM1O43490 JPX_2.1-201ENST00000614161 69 ntBASIC2.23□□□□□ -2.05
PROM1O43490 MIR3658-201ENST00000636291 56 ntBASIC2.23□□□□□ -2.05
PROM1O43490 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
PROM1O43490 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PROM1O43490 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
PROM1O43490 SNORA33-201ENST00000363664 130 ntBASIC2.22□□□□□ -2.05
PROM1O43490 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
PROM1O43490 SNORA8-201ENST00000384574 139 ntBASIC2.22□□□□□ -2.05
PROM1O43490 RNU11-5P-201ENST00000391216 129 ntBASIC2.22□□□□□ -2.05
PROM1O43490 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.22□□□□□ -2.05
PROM1O43490 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.22□□□□□ -2.05
PROM1O43490 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.22□□□□□ -2.05
PROM1O43490 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
PROM1O43490 Y_RNA.676-201ENST00000516393 96 ntBASIC2.22□□□□□ -2.05
PROM1O43490 RNU7-121P-201ENST00000516604 62 ntBASIC2.22□□□□□ -2.05
PROM1O43490 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
PROM1O43490 AC022202.1-201ENST00000613515 211 ntBASIC2.22□□□□□ -2.05
PROM1O43490 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.22□□□□□ -2.05
PROM1O43490 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PROM1O43490 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PROM1O43490 RNA5SP493-201ENST00000364115 91 ntBASIC2.21□□□□□ -2.06
PROM1O43490 SNORD50.2-201ENST00000365465 70 ntBASIC2.21□□□□□ -2.06
PROM1O43490 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
PROM1O43490 RNU6-131P-201ENST00000391144 107 ntBASIC2.21□□□□□ -2.06
PROM1O43490 MIR513C-201ENST00000401352 84 ntBASIC2.21□□□□□ -2.06
PROM1O43490 AL591806.2-201ENST00000433122 173 ntBASIC2.21□□□□□ -2.06
PROM1O43490 RNA5SP272-201ENST00000516095 111 ntBASIC2.21□□□□□ -2.06
PROM1O43490 SNORA25.12-201ENST00000516202 82 ntBASIC2.21□□□□□ -2.06
PROM1O43490 RNU6-426P-201ENST00000516464 97 ntBASIC2.21□□□□□ -2.06
PROM1O43490 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PROM1O43490 AL353149.1-201ENST00000610667 244 ntBASIC2.21□□□□□ -2.06
PROM1O43490 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
PROM1O43490 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
PROM1O43490 AC100821.1-201ENST00000523153 2479 ntBASIC2.2□□□□□ -2.06
PROM1O43490 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
PROM1O43490 RNU6-862P-201ENST00000362804 105 ntBASIC2.2□□□□□ -2.06
PROM1O43490 RNU6-1209P-201ENST00000363655 107 ntBASIC2.2□□□□□ -2.06
PROM1O43490 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
PROM1O43490 MIR1289-2-201ENST00000408360 111 ntBASIC2.2□□□□□ -2.06
PROM1O43490 RN7SKP223-201ENST00000410582 62 ntBASIC2.2□□□□□ -2.06
PROM1O43490 SNRPGP8-201ENST00000454064 226 ntBASIC2.2□□□□□ -2.06
PROM1O43490 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
PROM1O43490 RPS27P21-201ENST00000486977 252 ntBASIC2.2□□□□□ -2.06
PROM1O43490 AC108210.2-201ENST00000503681 201 ntBASIC2.2□□□□□ -2.06
PROM1O43490 RNU7-128P-201ENST00000517247 62 ntBASIC2.2□□□□□ -2.06
PROM1O43490 MIR548X2-201ENST00000579776 100 ntBASIC2.2□□□□□ -2.06
PROM1O43490 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
PROM1O43490 AL021707.8-201ENST00000609428 183 ntBASIC2.2□□□□□ -2.06
PROM1O43490 MIR6079-201ENST00000635807 62 ntBASIC2.2□□□□□ -2.06
PROM1O43490 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
PROM1O43490 ZNF702P-202ENST00000434269 1966 ntBASIC2.19□□□□□ -2.06
PROM1O43490 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PROM1O43490 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.19□□□□□ -2.06
PROM1O43490 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
PROM1O43490 Y_RNA.796-201ENST00000364268 102 ntBASIC2.19□□□□□ -2.06
PROM1O43490 Y_RNA.799-201ENST00000364992 102 ntBASIC2.19□□□□□ -2.06
PROM1O43490 Y_RNA.432-201ENST00000384087 111 ntBASIC2.19□□□□□ -2.06
PROM1O43490 MIR764-201ENST00000390811 85 ntBASIC2.19□□□□□ -2.06
PROM1O43490 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
PROM1O43490 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
PROM1O43490 RPS27P1-201ENST00000450552 247 ntBASIC2.19□□□□□ -2.06
PROM1O43490 RNU6-1299P-201ENST00000516316 100 ntBASIC2.19□□□□□ -2.06
PROM1O43490 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PROM1O43490 AC018630.2-201ENST00000534866 2403 ntBASIC2.19□□□□□ -2.06
PROM1O43490 RNU6-1164P-201ENST00000364428 107 ntBASIC2.18□□□□□ -2.06
PROM1O43490 RNU6-768P-201ENST00000384683 107 ntBASIC2.18□□□□□ -2.06
PROM1O43490 Y_RNA.568-201ENST00000384742 113 ntBASIC2.18□□□□□ -2.06
PROM1O43490 MIR515-2-201ENST00000384883 83 ntBASIC2.18□□□□□ -2.06
PROM1O43490 MIR515-1-201ENST00000384884 83 ntBASIC2.18□□□□□ -2.06
PROM1O43490 MIR569-201ENST00000385228 96 ntBASIC2.18□□□□□ -2.06
PROM1O43490 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
PROM1O43490 AL117342.1-201ENST00000404861 406 ntBASIC2.18□□□□□ -2.06
PROM1O43490 RNU2-70P-201ENST00000410718 179 ntBASIC2.18□□□□□ -2.06
PROM1O43490 RPL30P13-201ENST00000418873 348 ntBASIC2.18□□□□□ -2.06
PROM1O43490 CST2P1-201ENST00000425770 87 ntBASIC2.18□□□□□ -2.06
PROM1O43490 uc_338.4-201ENST00000616635 176 ntBASIC2.18□□□□□ -2.06
PROM1O43490 MIR6844-201ENST00000637122 62 ntBASIC2.18□□□□□ -2.06
PROM1O43490 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
PROM1O43490 SNORA20-201ENST00000384662 132 ntBASIC2.17□□□□□ -2.06
PROM1O43490 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
PROM1O43490 RNU4-43P-201ENST00000410628 137 ntBASIC2.17□□□□□ -2.06
PROM1O43490 MLLT10P1-201ENST00000418346 262 ntBASIC2.17□□□□□ -2.06
PROM1O43490 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
PROM1O43490 AL603825.1-201ENST00000438481 80 ntBASIC2.17□□□□□ -2.06
PROM1O43490 SNORD11-201ENST00000459124 84 ntBASIC2.17□□□□□ -2.06
PROM1O43490 AL163195.1-201ENST00000496941 348 ntBASIC2.17□□□□□ -2.06
PROM1O43490 RNU6-197P-201ENST00000516680 100 ntBASIC2.17□□□□□ -2.06
PROM1O43490 AC112693.2-201ENST00000556538 232 ntBASIC2.17□□□□□ -2.06
PROM1O43490 MIR3169-201ENST00000578032 83 ntBASIC2.17□□□□□ -2.06
PROM1O43490 AC091178.2-201ENST00000584401 117 ntBASIC2.17□□□□□ -2.06
PROM1O43490 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
PROM1O43490 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms