Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 Y_RNA.241-201ENST00000364470 117 ntBASIC3.63□□□□□ -1.83
HOXA2O43364 SNORA27-201ENST00000384323 126 ntBASIC3.63□□□□□ -1.83
HOXA2O43364 Y_RNA.531-201ENST00000384589 121 ntBASIC3.63□□□□□ -1.83
HOXA2O43364 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HOXA2O43364 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
HOXA2O43364 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.63□□□□□ -1.83
HOXA2O43364 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HOXA2O43364 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA2O43364 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXA2O43364 RNA5SP374-201ENST00000362939 125 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 SNORD78.1-201ENST00000390866 65 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 RNA5SP144-201ENST00000410846 116 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 RNU7-96P-201ENST00000459535 64 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 RPS23P4-201ENST00000487908 423 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 MIR4694-201ENST00000578534 80 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 uc_338.25-201ENST00000613756 156 ntBASIC3.62□□□□□ -1.83
HOXA2O43364 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXA2O43364 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXA2O43364 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXA2O43364 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXA2O43364 SNORD115-19-201ENST00000363098 82 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 SNORD115-18-201ENST00000363293 82 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 Y_RNA.155-201ENST00000363632 101 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 SNORD115-17-201ENST00000364612 82 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 RNU6-283P-201ENST00000364788 107 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 RNU6-163P-201ENST00000384396 106 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 SNORA11.4-201ENST00000408823 129 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 MIR3616-201ENST00000584070 92 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 AC087741.2-201ENST00000619415 172 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 SCARNA15.3-201ENST00000626315 122 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 SCARNA4.1-201ENST00000628597 123 ntBASIC3.61□□□□□ -1.83
HOXA2O43364 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXA2O43364 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HOXA2O43364 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXA2O43364 SNORA4.2-201ENST00000365313 147 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 RNU6-424P-201ENST00000384367 105 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 MIR1262-201ENST00000408276 93 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 RNU6-733P-201ENST00000410759 104 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 STAG3L5P-204ENST00000443759 179 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 AC114811.1-201ENST00000507207 168 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 RNU6-998P-201ENST00000515894 101 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 MIR3618-201ENST00000580330 88 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 SNORA28-201ENST00000606769 126 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 AL162274.2-201ENST00000614406 332 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXA2O43364 MIR203B-201ENST00000636080 86 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 AC017071.1-201ENST00000564407 2204 ntBASIC3.6□□□□□ -1.83
HOXA2O43364 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HOXA2O43364 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA2O43364 Y_RNA.17-201ENST00000362433 111 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 RNY1P10-201ENST00000363268 113 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 SNORA25.6-201ENST00000364121 118 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 RNU6-409P-201ENST00000384114 104 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 Y_RNA.593-201ENST00000410292 98 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA2O43364 RN7SL93P-201ENST00000463035 293 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 AL049873.1-201ENST00000480540 376 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA2O43364 RNU6-56P-201ENST00000516986 93 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 SNORA31.26-201ENST00000517250 137 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 AC004812.1-201ENST00000540773 146 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 AC022149.2-201ENST00000621061 203 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 AC021613.1-201ENST00000623880 111 ntBASIC3.59□□□□□ -1.83
HOXA2O43364 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXA2O43364 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXA2O43364 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
HOXA2O43364 RNA5SP493-201ENST00000364115 91 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 Y_RNA.290-201ENST00000364879 114 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 Y_RNA.299-201ENST00000364973 94 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 MIR627-201ENST00000384979 97 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 AC104332.2-201ENST00000429959 156 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 AL606517.2-201ENST00000442855 241 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 RNU7-61P-201ENST00000515897 61 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 AC090821.2-201ENST00000523552 176 ntBASIC3.58□□□□□ -1.84
HOXA2O43364 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
HOXA2O43364 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA2O43364 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-34-201ENST00000362441 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-12-201ENST00000362583 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-29-201ENST00000362834 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 RNU6-363P-201ENST00000362895 105 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-9-201ENST00000362912 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-21-201ENST00000362963 81 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 RNU1-18P-201ENST00000363062 164 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-14-201ENST00000363090 81 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 RNU6-23P-201ENST00000363283 107 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-13-201ENST00000363358 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-41-201ENST00000363608 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-11-201ENST00000363616 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-5-201ENST00000363633 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-39-201ENST00000363694 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-4-201ENST00000363810 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-16-201ENST00000363887 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-6-201ENST00000363942 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-42-201ENST00000364273 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-15-201ENST00000364809 81 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-1-201ENST00000364961 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-26-201ENST00000365067 82 ntBASIC3.57□□□□□ -1.84
HOXA2O43364 SNORD115-10-201ENST00000365073 81 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms