Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL355297.2-201ENST00000604792 129 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 AC242852.1-201ENST00000612151 96 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 U2.20-201ENST00000613956 192 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 RN7SL853P-201ENST00000617250 223 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 AC244015.1-201ENST00000622301 99 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 MIR3914-2-201ENST00000637339 95 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SRGAP3O43295 ZNF658B-202ENST00000615961 3375 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SRGAP3O43295 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SRGAP3O43295 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SRGAP3O43295 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SRGAP3O43295 Y_RNA.114-201ENST00000363265 113 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 MIR520G-201ENST00000385064 90 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 AL356320.1-201ENST00000429616 163 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 AC092427.1-202ENST00000430569 476 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 AL158147.1-201ENST00000443970 75 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 PDCD5P2-201ENST00000507570 312 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 RNU6-1146P-201ENST00000516282 102 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 MIR4662B-201ENST00000579498 81 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 MIR3124-201ENST00000582636 67 ntBASIC2.76□□□□□ -1.97
SRGAP3O43295 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
SRGAP3O43295 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SRGAP3O43295 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SRGAP3O43295 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 Y_RNA.486-201ENST00000384398 107 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 MIR95-201ENST00000385072 81 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 SNORA40.5-201ENST00000391061 128 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 RNY4P18-201ENST00000391107 89 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.75□□□□□ -1.97
SRGAP3O43295 SNORD33.1-201ENST00000516213 88 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 RNU6-1291P-201ENST00000516591 104 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 RNU1-104P-201ENST00000517280 175 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 AL356280.1-201ENST00000603614 379 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 AC009831.4-201ENST00000620744 325 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 U6.95-201ENST00000636931 70 ntBASIC2.75□□□□□ -1.97
SRGAP3O43295 MIR340-201ENST00000362125 95 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 snoU2-30.2-201ENST00000362805 70 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 RNU6-1138P-201ENST00000365359 106 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 SNORA80E-201ENST00000384744 137 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 RNA5SP425-201ENST00000410336 112 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 RN7SKP223-201ENST00000410582 62 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 TRBV12-1-201ENST00000479785 344 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 YWHAEP4-201ENST00000505390 198 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 AC011406.1-201ENST00000512440 370 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 RNU6-126P-201ENST00000516685 103 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 RNU6-365P-201ENST00000517113 106 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 RNU6-667P-201ENST00000517186 102 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 AC007229.1-201ENST00000590455 412 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 AC108081.1-201ENST00000604358 221 ntBASIC2.74□□□□□ -1.97
SRGAP3O43295 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SRGAP3O43295 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SRGAP3O43295 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.73□□□□□ -1.97
SRGAP3O43295 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SRGAP3O43295 RNU6-508P-201ENST00000363231 103 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 SNORA12.1-201ENST00000390873 148 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.73□□□□□ -1.97
SRGAP3O43295 RNU6-1041P-201ENST00000516254 102 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 Y_RNA.709-201ENST00000516952 92 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 RNU2-60P-201ENST00000517290 128 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 MIR3121-201ENST00000579680 77 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 MIR6873-201ENST00000622788 63 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 AC245060.5-201ENST00000610778 3293 ntBASIC2.73□□□□□ -1.97
SRGAP3O43295 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SRGAP3O43295 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SRGAP3O43295 Y_RNA.52-201ENST00000362760 96 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 Y_RNA.267-201ENST00000364679 109 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 Y_RNA.280-201ENST00000364765 112 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 AL603914.1-201ENST00000401964 204 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 RNU2-48P-201ENST00000410694 191 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 RNA5SP127-201ENST00000411051 133 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 Y_RNA.630-201ENST00000411370 108 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 SNRPGP10-201ENST00000432323 225 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.72□□□□□ -1.97
SRGAP3O43295 NDUFA4P2-201ENST00000489989 244 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 HMGN1P7-201ENST00000491722 313 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 CYCTP-201ENST00000504253 315 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 MRPS17P9-201ENST00000511924 393 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 RNA5SP200-201ENST00000516360 103 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 AC007751.1-201ENST00000529260 376 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 MIR1273D-201ENST00000577266 86 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 MIR4446-201ENST00000578505 67 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 MIR3129-201ENST00000581095 76 ntBASIC2.72□□□□□ -1.97
SRGAP3O43295 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.71□□□□□ -1.98
SRGAP3O43295 Y_RNA.66-201ENST00000362862 102 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 Y_RNA.253-201ENST00000364562 112 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 RNU6-309P-201ENST00000364573 106 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 SNORA22-201ENST00000383907 134 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 MIR561-201ENST00000385216 97 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 RNA5SP467-201ENST00000391274 118 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 EDDM3CP-201ENST00000415977 425 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 RNU7-99P-201ENST00000516271 62 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.71□□□□□ -1.98
SRGAP3O43295 AC022217.4-201ENST00000604389 163 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 AL359075.3-201ENST00000613288 217 ntBASIC2.71□□□□□ -1.98
SRGAP3O43295 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SRGAP3O43295 RNU1-96P-201ENST00000364163 162 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 RNU6-647P-201ENST00000364243 107 ntBASIC2.7□□□□□ -1.98
SRGAP3O43295 SNORD58C-201ENST00000365223 64 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms