Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HMGN2P32-201ENST00000444648 269 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 MTATP6P26-201ENST00000445926 662 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 Z94722.1-201ENST00000604328 474 ntBASIC-1.47□□□□□ -2.64
CHD1O14646 ELOCP4-201ENST00000420090 333 ntBASIC-1.48□□□□□ -2.65
CHD1O14646 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.48□□□□□ -2.65
CHD1O14646 HLA-S-202ENST00000425174 53 ntBASIC-1.48□□□□□ -2.65
CHD1O14646 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.48□□□□□ -2.65
CHD1O14646 SNORA18.4-201ENST00000516440 124 ntBASIC-1.48□□□□□ -2.65
CHD1O14646 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.48□□□□□ -2.65
CHD1O14646 MIR8055-201ENST00000610739 97 ntBASIC-1.48□□□□□ -2.65
CHD1O14646 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.48□□□□□ -2.65
CHD1O14646 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 RNU6-727P-201ENST00000363592 107 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 SNORD115-7-201ENST00000365306 82 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 MTCYBP36-201ENST00000404146 440 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 RPL7P42-201ENST00000481005 679 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 AC022784.5-201ENST00000522241 437 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.49□□□□□ -2.65
CHD1O14646 MIR3684-201ENST00000579779 74 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 AC023510.2-201ENST00000622162 746 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 MTCO3P40-201ENST00000392516 676 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 AL354751.2-201ENST00000415471 210 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 AC090844.1-201ENST00000422019 156 ntBASIC-1.49□□□□□ -2.65
CHD1O14646 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.49□□□□□ -2.65
CHD1O14646 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.49□□□□□ -2.65
CHD1O14646 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.5□□□□□ -2.65
CHD1O14646 AC073464.1-201ENST00000429823 534 ntBASIC-1.5□□□□□ -2.65
CHD1O14646 AL500527.2-201ENST00000454105 95 ntBASIC-1.5□□□□□ -2.65
CHD1O14646 MTCO2P6-201ENST00000463134 685 ntBASIC-1.5□□□□□ -2.65
CHD1O14646 RNU6-830P-201ENST00000516353 107 ntBASIC-1.5□□□□□ -2.65
CHD1O14646 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.5□□□□□ -2.65
CHD1O14646 SNORD115-42-201ENST00000364273 82 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 SNORD115.1-201ENST00000391109 76 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 AC018865.2-201ENST00000423631 129 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 MTCO3P38-201ENST00000468910 766 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 AC116353.3-201ENST00000511215 249 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 uc_338.10-201ENST00000621872 182 ntBASIC-1.51□□□□□ -2.65
CHD1O14646 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.52□□□□□ -2.65
CHD1O14646 SNORD114-7-201ENST00000362520 77 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RNU4-1-201ENST00000363925 141 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 AL137792.2-201ENST00000443484 235 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RPL39P25-201ENST00000449384 154 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RNU2-11P-201ENST00000459191 187 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.52□□□□□ -2.65
CHD1O14646 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.52□□□□□ -2.65
CHD1O14646 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.52□□□□□ -2.65
CHD1O14646 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.52□□□□□ -2.65
CHD1O14646 RNU2-13P-201ENST00000515909 113 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RNU6-612P-201ENST00000516909 102 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RNU6-490P-201ENST00000362985 107 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 SCARNA18B-201ENST00000458806 135 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 U8.19-201ENST00000459095 133 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 U8.22-201ENST00000459141 133 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 RNU7-181P-201ENST00000517234 74 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.52□□□□□ -2.65
CHD1O14646 MIR4280-201ENST00000582178 76 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 AC022418.1-201ENST00000624118 445 ntBASIC-1.52□□□□□ -2.65
CHD1O14646 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
CHD1O14646 RNU6-509P-201ENST00000363519 107 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 RNU6-117P-201ENST00000365415 107 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 RNU6-442P-201ENST00000383968 104 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 SNORD70.1-201ENST00000391007 85 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 RNU6-550P-201ENST00000391057 101 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 SNORD110-201ENST00000408189 75 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 MTND3P9-201ENST00000429526 346 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 SNRPGP10-201ENST00000432323 225 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 AGGF1P4-201ENST00000568249 801 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 MIR4770-201ENST00000579149 58 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 AP000942.4-201ENST00000604811 241 ntBASIC-1.53□□□□□ -2.65
CHD1O14646 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 RNU6-715P-201ENST00000365204 103 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 RNU4-83P-201ENST00000410863 133 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 AF186996.7-201ENST00000492781 209 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.54□□□□□ -2.66
CHD1O14646 AC011352.1-201ENST00000512300 793 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 AC022616.6-201ENST00000520479 119 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 AC140658.3-201ENST00000567603 271 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.54□□□□□ -2.66
CHD1O14646 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 SNORA1-201ENST00000384107 130 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 RNU6-602P-201ENST00000411155 105 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 RNU6-334P-201ENST00000517072 102 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 AC019226.2-201ENST00000625973 424 ntBASIC-1.54□□□□□ -2.66
CHD1O14646 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.55□□□□□ -2.66
CHD1O14646 MIR496-201ENST00000385226 102 ntBASIC-1.55□□□□□ -2.66
CHD1O14646 AL590002.1-201ENST00000406554 418 ntBASIC-1.55□□□□□ -2.66
CHD1O14646 AL008987.1-201ENST00000415528 237 ntBASIC-1.55□□□□□ -2.66
CHD1O14646 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.55□□□□□ -2.66
CHD1O14646 AC236972.2-201ENST00000434979 310 ntBASIC-1.55□□□□□ -2.66
CHD1O14646 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms