Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 HSBP1P2-201ENST00000299671 229 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF223E7ERA6 Y_RNA.532-201ENST00000384590 113 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 SNORA11.4-201ENST00000408823 129 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF223E7ERA6 AL035423.1-201ENST00000420331 213 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF223E7ERA6 RNU6-1108P-201ENST00000516308 104 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 RNA5SP168-201ENST00000516642 112 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 RNA5SP309-201ENST00000516670 106 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 RNU7-143P-201ENST00000516781 65 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.3□□□□□ -1.88
RNF223E7ERA6 MIR548AR-201ENST00000582191 57 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 U3.45-201ENST00000607547 219 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 MIR8055-201ENST00000610739 97 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 MIR8065-201ENST00000620577 100 ntBASIC3.3□□□□□ -1.88
RNF223E7ERA6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RNF223E7ERA6 MAPK10-253ENST00000641010 4072 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF223E7ERA6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF223E7ERA6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RNF223E7ERA6 RNA5SP493-201ENST00000364115 91 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 RNU6-800P-201ENST00000384473 103 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 SNORD28B-201ENST00000390993 75 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 SNORA26.7-201ENST00000391288 122 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 AL034345.1-201ENST00000407768 123 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 SNORA11.2-201ENST00000408318 127 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 AC104619.4-201ENST00000510773 249 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 RNU7-12P-201ENST00000516030 62 ntBASIC3.29□□□□□ -1.88
RNF223E7ERA6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF223E7ERA6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RNF223E7ERA6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RNF223E7ERA6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF223E7ERA6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF223E7ERA6 SCN1A-220ENST00000641603 12506 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 Y_RNA.537-201ENST00000384626 109 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 SNORD30.1-201ENST00000391309 70 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 RNU7-85P-201ENST00000458851 63 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 snoU13.16-201ENST00000459350 104 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 AC023141.11-201ENST00000508864 202 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 MIR4484-201ENST00000582855 83 ntBASIC3.28□□□□□ -1.88
RNF223E7ERA6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
RNF223E7ERA6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF223E7ERA6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF223E7ERA6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF223E7ERA6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF223E7ERA6 RNU5F-1-201ENST00000362507 117 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 RNA5SP399-201ENST00000364003 117 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 SNORA25B-201ENST00000365507 128 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 RNU6-471P-201ENST00000383944 106 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 MIR93-201ENST00000385024 80 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 AC069285.2-201ENST00000440210 275 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 VWA8P1-201ENST00000510889 176 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 AC110741.2-201ENST00000605278 268 ntBASIC3.27□□□□□ -1.89
RNF223E7ERA6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF223E7ERA6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF223E7ERA6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF223E7ERA6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF223E7ERA6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF223E7ERA6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
RNF223E7ERA6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF223E7ERA6 RNU6-296P-201ENST00000384608 107 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 RNU6-1067P-201ENST00000384752 107 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 RNU6-587P-201ENST00000391282 106 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 MIR1262-201ENST00000408276 93 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF223E7ERA6 HLA-N-201ENST00000437516 135 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 AC093850.1-201ENST00000454121 251 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 SNORD123-201ENST00000459473 70 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 RN7SL293P-201ENST00000481765 281 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 MIR3169-201ENST00000578032 83 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 MIR7702-201ENST00000621931 59 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 U6.111-201ENST00000636093 83 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 U6.105-201ENST00000637379 88 ntBASIC3.26□□□□□ -1.89
RNF223E7ERA6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF223E7ERA6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF223E7ERA6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RNF223E7ERA6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF223E7ERA6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms