Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 snoU13.9-201ENST00000458927 103 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 RNA5SP445-201ENST00000515889 115 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.676-201ENST00000516393 96 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 SNORA40.15-201ENST00000516884 107 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 DEFB108E-201ENST00000524692 240 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 MIR4709-201ENST00000577272 72 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 AL365434.2-201ENST00000607979 234 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 MIR8063-201ENST00000621930 81 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 ICE2P2-201ENST00000483823 2787 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-271P-201ENST00000363858 105 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1105P-201ENST00000384774 107 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-763P-201ENST00000390865 106 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1109P-201ENST00000391187 107 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 PIGPP3-201ENST00000425307 415 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC104332.1-201ENST00000440471 797 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 RNU7-141P-201ENST00000459304 62 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 HMGN1P10-201ENST00000474557 553 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC092991.1-201ENST00000477176 376 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-902P-201ENST00000517212 91 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC024995.1-201ENST00000523014 93 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC024405.2-202ENST00000532731 184 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AL591926.4-201ENST00000616895 298 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 AC006435.5-201ENST00000624486 112 ntBASIC1.09□□□□□ -2.23
TRIM49D1C9J1S8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TRIM49D1C9J1S8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
TRIM49D1C9J1S8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TRIM49D1C9J1S8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.237-201ENST00000364439 102 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-290P-201ENST00000365212 101 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.459-201ENST00000384251 102 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-1203P-201ENST00000410703 110 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.621-201ENST00000411065 96 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.637-201ENST00000459424 114 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 AC091959.1-201ENST00000495857 238 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-327P-201ENST00000516270 127 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 RNA5SP168-201ENST00000516642 112 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 AC011604.1-201ENST00000545978 196 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 AC136443.5-201ENST00000603741 370 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 AL008718.3-201ENST00000610217 321 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 AC073349.3-201ENST00000617616 186 ntBASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM49D1C9J1S8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.253-201ENST00000364562 112 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.341-201ENST00000365341 102 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 SNORA63.7-201ENST00000365579 123 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.380-201ENST00000365663 111 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.526-201ENST00000384572 110 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.569-201ENST00000384749 103 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 MTCO2P33-201ENST00000402100 465 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 MIR1267-201ENST00000408723 78 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 RNU2-38P-201ENST00000410856 79 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 COX6CP10-201ENST00000416832 224 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AL358176.2-201ENST00000425769 204 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-1278P-201ENST00000516130 107 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-341P-201ENST00000516973 96 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AL117187.1-201ENST00000555482 181 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 MIR4643-201ENST00000577473 78 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AC005357.1-201ENST00000588399 301 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 SNORD113-5-201ENST00000607261 78 ntBASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.07□□□□□ -2.24
TRIM49D1C9J1S8 MIR337-201ENST00000362281 93 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 SNORD68-201ENST00000363214 84 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.133-201ENST00000363428 110 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-414P-201ENST00000363705 104 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-53P-201ENST00000365367 106 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.368-201ENST00000365547 113 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 SNORA72.4-201ENST00000384174 132 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-424P-201ENST00000384367 105 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.574-201ENST00000384766 95 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 MIR515-2-201ENST00000384883 83 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 MIR515-1-201ENST00000384884 83 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 MIR526A1-201ENST00000384897 85 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-383P-201ENST00000410864 94 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 AL731563.1-201ENST00000442202 214 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 PGBD4P5-201ENST00000445958 426 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 AL049830.1-201ENST00000468034 425 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 SEPT14P8-201ENST00000508026 178 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 MTND1P19-201ENST00000511780 315 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-917P-201ENST00000516294 104 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 RNU6-1338P-201ENST00000516328 91 ntBASIC1.06□□□□□ -2.24
TRIM49D1C9J1S8 Y_RNA.680-201ENST00000516441 93 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms