Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU6-1007P-201ENST00000516586 107 ntBASIC2.2□□□□□ -2.06
CCDC187A0A096LP49 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
CCDC187A0A096LP49 MIR3169-201ENST00000578032 83 ntBASIC2.2□□□□□ -2.06
CCDC187A0A096LP49 MIR3646-201ENST00000578301 84 ntBASIC2.2□□□□□ -2.06
CCDC187A0A096LP49 AC067747.1-201ENST00000608026 250 ntBASIC2.2□□□□□ -2.06
CCDC187A0A096LP49 TUG1_4.1-201ENST00000619464 181 ntBASIC2.2□□□□□ -2.06
CCDC187A0A096LP49 snoU2-30.2-201ENST00000362805 70 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 Y_RNA.525-201ENST00000384570 113 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 MIR15B-201ENST00000385045 98 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 RNU6-1228P-201ENST00000391014 107 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 RNY4P18-201ENST00000391107 89 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 RNU6-855P-201ENST00000410395 104 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AC006461.1-201ENST00000412637 326 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 ATP5J2P3-201ENST00000451550 258 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 RNU6-1041P-201ENST00000516254 102 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 RNU2-19P-201ENST00000517288 84 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AC027419.1-201ENST00000522976 328 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC187A0A096LP49 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 AC131280.1-202ENST00000624067 4211 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 Y_RNA.124-201ENST00000363339 93 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 AL606845.1-201ENST00000404881 255 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 RNU7-107P-201ENST00000459121 61 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 RPS26P55-201ENST00000471178 356 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 RNA5SP20-201ENST00000515976 84 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 AC007229.1-201ENST00000590455 412 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC187A0A096LP49 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 RNU6-199P-201ENST00000362954 107 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 RNU6-1205P-201ENST00000363625 106 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 Y_RNA.280-201ENST00000364765 112 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 U8.7-201ENST00000364940 136 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 RNU6-144P-201ENST00000383951 107 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 BX510359.4-201ENST00000423750 193 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 AL121914.1-201ENST00000450188 156 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 HSPE1P13-201ENST00000451143 297 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 RPS27P22-201ENST00000478056 241 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 PDCD5P2-201ENST00000507570 312 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 Y_RNA.712-201ENST00000517011 92 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 MIR338-201ENST00000636369 67 ntBASIC2.17□□□□□ -2.06
CCDC187A0A096LP49 RNU6-755P-201ENST00000364400 103 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 Y_RNA.393-201ENST00000383936 102 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 RNA5SP465-201ENST00000391195 109 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 RNU6-588P-201ENST00000410281 105 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 RNU6-383P-201ENST00000410864 94 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 RNU7-115P-201ENST00000516433 55 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 AC127455.1-201ENST00000565496 145 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 MIR4438-201ENST00000585271 93 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 U7.2-201ENST00000607576 63 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 U6.73-201ENST00000619194 103 ntBASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC187A0A096LP49 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC187A0A096LP49 SNORA63.4-201ENST00000362763 126 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1082P-201ENST00000364574 107 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1056P-201ENST00000383996 107 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 MIR221-201ENST00000385135 110 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 AL117342.1-201ENST00000404861 406 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 MIR1283-2-201ENST00000408621 87 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 SNORA11.4-201ENST00000408823 129 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 AP001328.1-201ENST00000528550 176 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 AC007336.1-201ENST00000576365 3828 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 MIR4724-201ENST00000579485 89 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 MIR5694-201ENST00000581190 76 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 AL021707.8-201ENST00000609428 183 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 MIR548AY-201ENST00000617669 107 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
CCDC187A0A096LP49 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU1-22P-201ENST00000363334 158 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU6-728P-201ENST00000365375 104 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU6-597P-201ENST00000365620 102 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNY3P5-201ENST00000384127 102 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 SNORD116-13-201ENST00000384408 92 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU6-476P-201ENST00000384726 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms