Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 AC116407.4-201ENST00000623319 1061 ntBASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSX2IPQ9Y2D8 AC005332.1-201ENST00000577698 1310 ntBASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.27■□□□□ 0.84
SSX2IPQ9Y2D8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.83
SSX2IPQ9Y2D8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSX2IPQ9Y2D8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
SSX2IPQ9Y2D8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 AC104417.2-201ENST00000562989 1793 ntBASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 AC112907.2-201ENST00000448639 330 ntBASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 VENTXP5-201ENST00000523979 775 ntBASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSX2IPQ9Y2D8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 KRT18P38-201ENST00000449496 1282 ntBASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 ZNF444P1-201ENST00000559497 298 ntBASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSX2IPQ9Y2D8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms