Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 AL139424.1-201ENST00000607572 797 ntBASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 AL592071.1-201ENST00000611956 408 ntBASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ZC3H4Q9UPT8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 NUS1P2-201ENST00000417358 873 ntBASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 AC006128.1-201ENST00000624704 1661 ntBASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
ZC3H4Q9UPT8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 AC018712.1-201ENST00000455767 687 ntBASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 AC139887.3-201ENST00000568585 713 ntBASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 GPR32P1-201ENST00000601788 811 ntBASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 KRT8P7-201ENST00000533003 1432 ntBASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ZC3H4Q9UPT8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
ZC3H4Q9UPT8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.83■■□□□ 1.24
ZC3H4Q9UPT8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 RPL13AP23-201ENST00000480739 586 ntBASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AC009065.1-201ENST00000564055 1225 ntBASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 POM121L3P-201ENST00000419331 1163 ntBASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 RN7SL606P-201ENST00000472779 293 ntBASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 MIR7706-201ENST00000613747 67 ntBASIC22.82■■□□□ 1.24
ZC3H4Q9UPT8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H4Q9UPT8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H4Q9UPT8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H4Q9UPT8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ZC3H4Q9UPT8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms