Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SIX4Q9UIU6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 HEIH-201ENST00000623091 1652 ntBASIC20.2■□□□□ 0.82
SIX4Q9UIU6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 ATP5G1P1-201ENST00000448724 379 ntBASIC20.2■□□□□ 0.82
SIX4Q9UIU6 AC104076.2-201ENST00000448912 469 ntBASIC20.2■□□□□ 0.82
SIX4Q9UIU6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 AC083906.6-201ENST00000641366 219 ntBASIC20.2■□□□□ 0.82
SIX4Q9UIU6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.2■□□□□ 0.82
SIX4Q9UIU6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 MTMR9LP-203ENST00000426597 1545 ntBASIC20.19■□□□□ 0.82
SIX4Q9UIU6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 AC009947.2-201ENST00000444014 672 ntBASIC20.19■□□□□ 0.82
SIX4Q9UIU6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 MIR3180-5-201ENST00000583743 153 ntBASIC20.19■□□□□ 0.82
SIX4Q9UIU6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.19■□□□□ 0.82
SIX4Q9UIU6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.19■□□□□ 0.82
SIX4Q9UIU6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.18■□□□□ 0.82
SIX4Q9UIU6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 AL512604.3-201ENST00000569583 964 ntBASIC20.18■□□□□ 0.82
SIX4Q9UIU6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.18■□□□□ 0.82
SIX4Q9UIU6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 AC117947.1-201ENST00000427448 529 ntBASIC20.17■□□□□ 0.82
SIX4Q9UIU6 BX664615.1-201ENST00000443558 458 ntBASIC20.17■□□□□ 0.82
SIX4Q9UIU6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.17■□□□□ 0.82
SIX4Q9UIU6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms