Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 ZNF815P-204ENST00000434898 1737 ntBASIC21.94■■□□□ 1.1
SDF4Q9BRK5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 AL138781.2-201ENST00000617896 1843 ntBASIC21.94■■□□□ 1.1
SDF4Q9BRK5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SDF4Q9BRK5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 MMP23A-201ENST00000234610 1017 ntBASIC21.93■■□□□ 1.1
SDF4Q9BRK5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 AC087499.1-201ENST00000418141 1075 ntBASIC21.93■■□□□ 1.1
SDF4Q9BRK5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 CROCCP3-202ENST00000420820 1947 ntBASIC21.93■■□□□ 1.1
SDF4Q9BRK5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 MIR6786-201ENST00000616843 113 ntBASIC21.93■■□□□ 1.1
SDF4Q9BRK5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SDF4Q9BRK5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 ECEL1P3-201ENST00000427961 737 ntBASIC21.92■■□□□ 1.1
SDF4Q9BRK5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 AP000525.1-201ENST00000608286 694 ntBASIC21.92■■□□□ 1.1
SDF4Q9BRK5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SDF4Q9BRK5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 AC079598.2-202ENST00000546624 1451 ntBASIC21.91■■□□□ 1.1
SDF4Q9BRK5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 LINC01023-201ENST00000606054 436 ntBASIC21.91■■□□□ 1.1
SDF4Q9BRK5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.91■■□□□ 1.1
SDF4Q9BRK5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SDF4Q9BRK5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 B3GAT3P1-201ENST00000471720 806 ntBASIC21.9■■□□□ 1.1
SDF4Q9BRK5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 AC133561.5-201ENST00000635547 218 ntBASIC21.9■■□□□ 1.1
SDF4Q9BRK5 AC006333.2-201ENST00000607957 2099 ntBASIC21.9■■□□□ 1.1
SDF4Q9BRK5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SDF4Q9BRK5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms