Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RNF126P1-202ENST00000569893 925 ntBASIC20.16■□□□□ 0.82
CASD1Q96PB1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 MIR564-202ENST00000385049 94 ntBASIC20.15■□□□□ 0.82
CASD1Q96PB1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 TSPY22P-201ENST00000427496 604 ntBASIC20.15■□□□□ 0.82
CASD1Q96PB1 CHCHD2P8-201ENST00000429873 447 ntBASIC20.15■□□□□ 0.82
CASD1Q96PB1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 AC010240.3-201ENST00000607688 395 ntBASIC20.15■□□□□ 0.82
CASD1Q96PB1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 KRT8P32-201ENST00000512863 1461 ntBASIC20.15■□□□□ 0.82
CASD1Q96PB1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CASD1Q96PB1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CASD1Q96PB1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CASD1Q96PB1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.82
CASD1Q96PB1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASD1Q96PB1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASD1Q96PB1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASD1Q96PB1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASD1Q96PB1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.14■□□□□ 0.81
CASD1Q96PB1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASD1Q96PB1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 UNC93B7-201ENST00000509439 705 ntBASIC20.13■□□□□ 0.81
CASD1Q96PB1 RN7SL510P-201ENST00000581311 263 ntBASIC20.13■□□□□ 0.81
CASD1Q96PB1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASD1Q96PB1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CASD1Q96PB1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 IRX1P1-201ENST00000438849 1838 ntBASIC20.12■□□□□ 0.81
CASD1Q96PB1 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.12■□□□□ 0.81
CASD1Q96PB1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASD1Q96PB1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CASD1Q96PB1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms