Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
ABCA6Q8N139 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC28■■■□□ 2.07
ABCA6Q8N139 AC092183.1-201ENST00000469884 875 ntBASIC28■■■□□ 2.07
ABCA6Q8N139 AC092865.5-201ENST00000545435 363 ntBASIC28■■■□□ 2.07
ABCA6Q8N139 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
ABCA6Q8N139 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
ABCA6Q8N139 POLD2P1-201ENST00000511220 997 ntBASIC28■■■□□ 2.07
ABCA6Q8N139 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28■■■□□ 2.07
ABCA6Q8N139 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28■■■□□ 2.07
ABCA6Q8N139 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28■■■□□ 2.07
ABCA6Q8N139 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC28■■■□□ 2.07
ABCA6Q8N139 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
ABCA6Q8N139 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ABCA6Q8N139 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ABCA6Q8N139 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ABCA6Q8N139 KRT8P7-201ENST00000533003 1432 ntBASIC27.98■■■□□ 2.07
ABCA6Q8N139 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
ABCA6Q8N139 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC27.98■■■□□ 2.07
ABCA6Q8N139 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
ABCA6Q8N139 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
ABCA6Q8N139 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
ABCA6Q8N139 AL031284.1-201ENST00000419297 478 ntBASIC27.98■■■□□ 2.07
ABCA6Q8N139 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
ABCA6Q8N139 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC27.98■■■□□ 2.07
ABCA6Q8N139 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
ABCA6Q8N139 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC27.98■■■□□ 2.07
ABCA6Q8N139 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC27.98■■■□□ 2.07
ABCA6Q8N139 AC008556.1-201ENST00000610908 2040 ntBASIC27.98■■■□□ 2.07
ABCA6Q8N139 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ABCA6Q8N139 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
ABCA6Q8N139 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ABCA6Q8N139 MED22-202ENST00000371999 987 ntTSL 3 BASIC27.97■■■□□ 2.07
ABCA6Q8N139 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ABCA6Q8N139 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC27.97■■■□□ 2.07
ABCA6Q8N139 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC27.97■■■□□ 2.07
ABCA6Q8N139 NAT14-202ENST00000587400 416 ntTSL 5 BASIC27.97■■■□□ 2.07
ABCA6Q8N139 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ABCA6Q8N139 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
ABCA6Q8N139 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ABCA6Q8N139 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC27.97■■■□□ 2.07
ABCA6Q8N139 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 VENTXP7-201ENST00000475503 772 ntBASIC27.96■■■□□ 2.07
ABCA6Q8N139 MOK-208ENST00000519058 917 ntTSL 2 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 RPL18-209ENST00000550645 463 ntTSL 5 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 RPL18-214ENST00000552588 559 ntTSL 3 BASIC27.96■■■□□ 2.07
ABCA6Q8N139 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ABCA6Q8N139 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
ABCA6Q8N139 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 BX842568.4-201ENST00000421222 227 ntBASIC27.95■■■□□ 2.06
ABCA6Q8N139 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC27.95■■■□□ 2.06
ABCA6Q8N139 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
ABCA6Q8N139 AC106730.1-201ENST00000566722 1090 ntBASIC27.95■■■□□ 2.06
ABCA6Q8N139 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC27.95■■■□□ 2.06
ABCA6Q8N139 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC27.95■■■□□ 2.06
ABCA6Q8N139 AL049840.3-201ENST00000602669 611 ntBASIC27.95■■■□□ 2.06
ABCA6Q8N139 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 AC124864.1-201ENST00000623408 392 ntBASIC27.95■■■□□ 2.06
ABCA6Q8N139 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC27.95■■■□□ 2.06
ABCA6Q8N139 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ABCA6Q8N139 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
ABCA6Q8N139 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC27.94■■■□□ 2.06
ABCA6Q8N139 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 AC007375.3-201ENST00000600936 2314 ntBASIC27.94■■■□□ 2.06
ABCA6Q8N139 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ABCA6Q8N139 FAM197Y8-203ENST00000450145 560 ntBASIC27.94■■■□□ 2.06
ABCA6Q8N139 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
ABCA6Q8N139 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC27.94■■■□□ 2.06
ABCA6Q8N139 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms