Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.24□□□□□ -0.45
Hist3h2bbQ8CGP0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm43060-201ENSMUST00000200621 289 ntBASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hist3h2bbQ8CGP0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm27801-201ENSMUST00000184174 223 ntBASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Efs-202ENSMUST00000227037 2540 ntBASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hist3h2bbQ8CGP0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hist3h2bbQ8CGP0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hist3h2bbQ8CGP0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.21□□□□□ -0.46
Hist3h2bbQ8CGP0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist3h2bbQ8CGP0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hist3h2bbQ8CGP0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hist3h2bbQ8CGP0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist3h2bbQ8CGP0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hist3h2bbQ8CGP0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist3h2bbQ8CGP0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist3h2bbQ8CGP0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist3h2bbQ8CGP0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hist3h2bbQ8CGP0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms