Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
GPC6Q9Y625 Y_RNA.220-201ENST00000364244 109 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 U8.9-201ENST00000365667 134 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 Y_RNA.440-201ENST00000384120 114 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 MIR548D2-201ENST00000384955 97 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 MIR23A-201ENST00000385245 73 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 CST2P1-201ENST00000425770 87 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.18□□□□□ -1.9
GPC6Q9Y625 AL109933.2-201ENST00000452651 260 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 AC024995.1-201ENST00000523014 93 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 AC084364.2-201ENST00000546924 395 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 MIR4305-201ENST00000583252 102 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 AC002984.1-201ENST00000591692 448 ntBASIC3.18□□□□□ -1.9
GPC6Q9Y625 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
GPC6Q9Y625 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
GPC6Q9Y625 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
GPC6Q9Y625 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
GPC6Q9Y625 AC093908.1-201ENST00000623125 8092 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 RNA5SP109-201ENST00000391010 116 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 RN7SKP111-201ENST00000410349 271 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 AL606517.2-201ENST00000442855 241 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 STAG3L5P-204ENST00000443759 179 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 MIR3163-201ENST00000581592 73 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.17□□□□□ -1.9
GPC6Q9Y625 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 AC091932.4-201ENST00000623386 200 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 AP000648.3-201ENST00000623539 4507 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
GPC6Q9Y625 AC096644.4-201ENST00000563417 2912 ntBASIC3.17□□□□□ -1.9
GPC6Q9Y625 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
GPC6Q9Y625 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
GPC6Q9Y625 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
GPC6Q9Y625 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.16□□□□□ -1.9
GPC6Q9Y625 RNU6-23P-201ENST00000363283 107 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 U8.5-201ENST00000364528 136 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 RNU6-163P-201ENST00000384396 106 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 RNU6-938P-201ENST00000411285 103 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 RPS29P4-201ENST00000414733 161 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 RNU7-80P-201ENST00000459562 61 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 RN7SL297P-201ENST00000483161 293 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 RNU7-6P-201ENST00000516845 62 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 MIR4762-201ENST00000585261 75 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
GPC6Q9Y625 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.9
GPC6Q9Y625 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.15□□□□□ -1.9
GPC6Q9Y625 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
GPC6Q9Y625 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC6Q9Y625 RNA5SP482-201ENST00000391269 118 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC6Q9Y625 AC003685.2-201ENST00000422795 395 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 SNRPGP14-201ENST00000435400 219 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 snoU13.22-201ENST00000459428 104 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 AL049873.1-201ENST00000480540 376 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 RNU6-1116P-201ENST00000517269 99 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
GPC6Q9Y625 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC6Q9Y625 AL513534.2-201ENST00000603836 250 ntBASIC3.15□□□□□ -1.91
GPC6Q9Y625 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
GPC6Q9Y625 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC6Q9Y625 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
GPC6Q9Y625 RNA5SP493-201ENST00000364115 91 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 RNU6-461P-201ENST00000364195 107 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 Y_RNA.336-201ENST00000365307 109 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 MIR449B-201ENST00000384995 97 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 RPS3AP1-201ENST00000413190 320 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GPC6Q9Y625 RNU2-35P-201ENST00000516446 142 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 MIR4778-201ENST00000577635 80 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 MIR6075-201ENST00000620782 95 ntBASIC3.14□□□□□ -1.91
GPC6Q9Y625 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC6Q9Y625 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC6Q9Y625 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
GPC6Q9Y625 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GPC6Q9Y625 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
GPC6Q9Y625 SNORA71.3-201ENST00000362582 128 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 Y_RNA.241-201ENST00000364470 117 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 Y_RNA.454-201ENST00000384224 113 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 SNORD38C-201ENST00000384381 69 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 RNU6-816P-201ENST00000390914 107 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 RNU6-1268P-201ENST00000391214 107 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 RNU6-1239P-201ENST00000391310 107 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC6Q9Y625 AC114811.1-201ENST00000507207 168 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 AC062037.1-201ENST00000605302 128 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 AL442128.1-201ENST00000615151 90 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 Y_RNA.818-201ENST00000618813 71 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
GPC6Q9Y625 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
GPC6Q9Y625 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GPC6Q9Y625 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GPC6Q9Y625 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GPC6Q9Y625 SNORA70.4-201ENST00000365509 134 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 MTATP8P2-201ENST00000435212 202 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 AC099677.2-201ENST00000436385 175 ntBASIC3.12□□□□□ -1.91
GPC6Q9Y625 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms