Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AP003484.1-201ENST00000530974 250 ntBASIC3.27□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR3683-201ENST00000580847 82 ntBASIC3.27□□□□□ -1.89
PCDHGC4Q9Y5F7 HSPE1P19-201ENST00000603327 295 ntBASIC3.27□□□□□ -1.89
PCDHGC4Q9Y5F7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGC4Q9Y5F7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 SNORA8-201ENST00000384574 139 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 AL353689.1-201ENST00000438895 199 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU7-80P-201ENST00000459562 61 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR5680-201ENST00000577577 84 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 AC002984.1-201ENST00000591692 448 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGC4Q9Y5F7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU6-1099P-201ENST00000363533 107 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 Y_RNA.290-201ENST00000364879 114 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 snoU2-30.1-201ENST00000365012 70 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 SNORA48.2-201ENST00000390926 124 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 Y_RNA.601-201ENST00000410500 113 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR4778-201ENST00000577635 80 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR4762-201ENST00000585261 75 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 AC091932.4-201ENST00000623386 200 ntBASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGC4Q9Y5F7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 SNORA38.1-201ENST00000364172 131 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU4-16P-201ENST00000364737 141 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 RPL21P3-201ENST00000395517 478 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 AC107083.1-201ENST00000439643 279 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU7-94P-201ENST00000459576 63 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 SNORD45.4-201ENST00000516629 73 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 SNORA48.11-201ENST00000517015 89 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 AL353149.1-201ENST00000610667 244 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 AC025521.1-201ENST00000621624 286 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGC4Q9Y5F7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR342-201ENST00000362212 99 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU6-228P-201ENST00000362700 106 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 U8.5-201ENST00000364528 136 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU6-1124P-201ENST00000384169 107 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 Y_RNA.454-201ENST00000384224 113 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 Y_RNA.531-201ENST00000384589 121 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR128-1-201ENST00000384921 82 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 RNA5SP225-201ENST00000410874 135 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 AC115115.1-201ENST00000449927 248 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 AC113410.1-201ENST00000505029 247 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 MIR4474-201ENST00000579189 78 ntBASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGC4Q9Y5F7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 AC087499.4-201ENST00000448505 178 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 AL163195.1-201ENST00000496941 348 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 RNU7-61P-201ENST00000515897 61 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 AL356280.1-201ENST00000603614 379 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 YPEL5P2-201ENST00000605553 359 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 uc_338.25-201ENST00000613756 156 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 AC087741.2-201ENST00000619415 172 ntBASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGC4Q9Y5F7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PCDHGC4Q9Y5F7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 Y_RNA.10-201ENST00000362371 110 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 Y_RNA.336-201ENST00000365307 109 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 Y_RNA.507-201ENST00000384500 99 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 SNX2P2-201ENST00000424553 323 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AL445687.1-201ENST00000439946 251 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AL109933.2-201ENST00000452651 260 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 RNU6-667P-201ENST00000517186 102 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AC022254.1-201ENST00000567857 235 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 FAM71BP1-201ENST00000604431 523 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 IGLL4P-201ENST00000614590 133 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
PCDHGC4Q9Y5F7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms