Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RNU2-31P-201ENST00000516954 155 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 SCARNA24.2-201ENST00000516968 130 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 RNU6-341P-201ENST00000516973 96 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 DEFB108E-201ENST00000524692 240 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 AC005972.2-201ENST00000604690 348 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 AC068647.2-201ENST00000637380 353 ntBASIC1.61□□□□□ -2.15
YIPF1Q9Y548 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
YIPF1Q9Y548 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.6□□□□□ -2.15
YIPF1Q9Y548 Y_RNA.149-201ENST00000363558 117 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 RNU6-1048P-201ENST00000364054 107 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 RNU6-801P-201ENST00000364087 105 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 Y_RNA.456-201ENST00000384232 111 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 MIR568-201ENST00000385036 95 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 MIR520G-201ENST00000385064 90 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 TRBVB-201ENST00000477100 408 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 AC005840.1-201ENST00000498412 377 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 RNU6-1338P-201ENST00000516328 91 ntBASIC1.6□□□□□ -2.15
YIPF1Q9Y548 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.6□□□□□ -2.15
YIPF1Q9Y548 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.15
YIPF1Q9Y548 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
YIPF1Q9Y548 SNORA1B-201ENST00000362535 133 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 RNU6-326P-201ENST00000365480 107 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 Y_RNA.483-201ENST00000384380 101 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 SNORA53-201ENST00000391141 249 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 MIR1302-6-201ENST00000408466 90 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 RNU2-14P-201ENST00000411053 191 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 RNU7-34P-201ENST00000459394 64 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
YIPF1Q9Y548 AC136628.3-201ENST00000521868 290 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 AL161670.1-201ENST00000554348 137 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 MIR4709-201ENST00000577272 72 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 AL512605.2-201ENST00000592972 256 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 AP001282.2-201ENST00000616149 309 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 AC095038.3-201ENST00000634439 195 ntBASIC1.59□□□□□ -2.15
YIPF1Q9Y548 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
YIPF1Q9Y548 Y_RNA.237-201ENST00000364439 102 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 U8.7-201ENST00000364940 136 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 Y_RNA.396-201ENST00000383949 103 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 RNU6-1080P-201ENST00000383982 107 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 RNU6-203P-201ENST00000384038 104 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 Y_RNA.461-201ENST00000384263 103 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
YIPF1Q9Y548 RNU6-1248P-201ENST00000391096 64 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 RN7SKP200-201ENST00000410564 320 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 Y_RNA.621-201ENST00000411065 96 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.58□□□□□ -2.16
YIPF1Q9Y548 AC117454.1-201ENST00000491120 168 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 MTCO2P24-201ENST00000515611 426 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 RNU2-56P-201ENST00000516826 190 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 AC011604.1-201ENST00000545978 196 ntBASIC1.58□□□□□ -2.16
YIPF1Q9Y548 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.58□□□□□ -2.16
YIPF1Q9Y548 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.58□□□□□ -2.16
YIPF1Q9Y548 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
YIPF1Q9Y548 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AC100821.1-201ENST00000523153 2479 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 SNORA25.1-201ENST00000362326 128 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 RNU6-472P-201ENST00000384299 107 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 RNU6-950P-201ENST00000384651 107 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 RNU6-1031P-201ENST00000384773 107 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 MIR562-201ENST00000384894 95 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 SNORA12.1-201ENST00000390873 148 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 SNORA26.5-201ENST00000391215 123 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 RNA5SP247-201ENST00000411181 105 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 MTCYBP9-201ENST00000431021 303 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 STAG3L5P-204ENST00000443759 179 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AC091959.1-201ENST00000495857 238 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 TRMT112P2-201ENST00000512910 132 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 SERF1AP1-201ENST00000514575 187 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AP002004.2-201ENST00000531656 154 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.57□□□□□ -2.16
YIPF1Q9Y548 POLR3GP1-201ENST00000594073 261 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AC037487.3-201ENST00000606668 112 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
YIPF1Q9Y548 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
YIPF1Q9Y548 AC134026.1-201ENST00000623249 2239 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AL391987.6-201ENST00000305671 199 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 RNY1P10-201ENST00000363268 113 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 Y_RNA.265-201ENST00000364677 108 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 RNU6-1323P-201ENST00000384025 107 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 RNU6-514P-201ENST00000384208 107 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 RNU6-662P-201ENST00000384253 104 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.56□□□□□ -2.16
YIPF1Q9Y548 MTND3P2-201ENST00000438452 342 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AC104332.1-201ENST00000440471 797 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AL049830.1-201ENST00000468034 425 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.56□□□□□ -2.16
YIPF1Q9Y548 AC024405.2-202ENST00000532731 184 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 MIR4421-201ENST00000578133 69 ntBASIC1.56□□□□□ -2.16
YIPF1Q9Y548 SNORA77B-201ENST00000578179 125 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms