Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SNORD11-201ENST00000459124 84 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 RNU6-561P-201ENST00000516222 102 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 SNORA31.10-201ENST00000516482 106 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 AL358944.1-201ENST00000528537 144 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 AP002004.2-201ENST00000531656 154 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 AL591926.4-201ENST00000616895 298 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
R3HCC1Q9Y3T6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.75-201ENST00000362927 97 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-112P-201ENST00000363599 104 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 SNORA4.2-201ENST00000365313 147 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-301P-201ENST00000384277 107 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-296P-201ENST00000384608 107 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 MIR562-201ENST00000384894 95 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP496-201ENST00000391240 109 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 RNU5E-9P-201ENST00000411164 104 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 AL049830.1-201ENST00000468034 425 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP437-201ENST00000517249 129 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 MIR4435-1-201ENST00000582552 80 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 AL049861.1-201ENST00000603130 150 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 MIR8054-201ENST00000620877 86 ntBASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
R3HCC1Q9Y3T6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 SNORA16B-201ENST00000364674 135 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-275P-201ENST00000364910 107 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-440P-201ENST00000390882 105 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 AL512604.1-201ENST00000404812 257 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 HMGN1P7-201ENST00000491722 313 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 RNU2-56P-201ENST00000516826 190 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 AC109810.1-201ENST00000534066 224 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
R3HCC1Q9Y3T6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 RNU4-52P-201ENST00000384209 138 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 MIR524-201ENST00000385242 87 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-1228P-201ENST00000391014 107 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP100-201ENST00000410903 110 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP59-201ENST00000410922 110 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 HSPE1P9-201ENST00000440046 311 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 MIR4672-201ENST00000583126 81 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.63□□□□□ -1.99
R3HCC1Q9Y3T6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 SNORA12.1-201ENST00000390873 148 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP508-201ENST00000411327 119 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 HMGN2P38-201ENST00000423806 265 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 SNRPGP10-201ENST00000432323 225 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 AC069257.2-201ENST00000441819 155 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 AC011753.1-201ENST00000451001 220 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 AC090255.1-201ENST00000495779 349 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 RPL23AP63-201ENST00000498752 471 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 MIR4513-201ENST00000581077 86 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 JPX_2.1-201ENST00000614161 69 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 U1.36-201ENST00000620684 176 ntBASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
R3HCC1Q9Y3T6 MIR449A-201ENST00000362113 91 ntBASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP276-201ENST00000362580 94 ntBASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 MIR520A-201ENST00000384862 85 ntBASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 RNA5SP338-201ENST00000410495 85 ntBASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 SEPT7P4-201ENST00000437076 306 ntBASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
R3HCC1Q9Y3T6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 MIR126-201ENST00000362291 85 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 Y_RNA.23-201ENST00000362496 106 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-312P-201ENST00000364629 107 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-1135P-201ENST00000411083 103 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 MLLT10P1-201ENST00000418346 262 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 AL158823.1-201ENST00000418441 478 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 SNRPGP8-201ENST00000454064 226 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 AC234781.5-201ENST00000508429 271 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 MIR5694-201ENST00000581190 76 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 MIR6840-201ENST00000611937 71 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 uc_338.4-201ENST00000616635 176 ntBASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
R3HCC1Q9Y3T6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 RNU4-82P-201ENST00000362443 140 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 SNORD68-201ENST00000363214 84 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 RNY3P5-201ENST00000384127 102 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 MIR522-201ENST00000385071 87 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 STAG3L5P-204ENST00000443759 179 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 AL121914.1-201ENST00000450188 156 ntBASIC2.59□□□□□ -1.99
R3HCC1Q9Y3T6 RNU6-717P-201ENST00000459076 104 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms